Pyrenophora tritici-repentis: 6345847
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Entry
6345847 CDS
T10215
Symbol
PtrM4_141180
Name
(RefSeq) TFG2, Transcription initiation factor IIF, small subunit (RAP30)
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6345847 (PtrM4_141180)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6345847 (PtrM4_141180)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
6345847 (PtrM4_141180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Tau95
WASH-4_N
AAA_5
Motif
Other DBs
NCBI-GeneID:
6345847
NCBI-ProteinID:
XP_001937907
UniProt:
B2WC66
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All DBs
Position
8:complement(<1714700..>1715746)
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AA seq
348 aa
AA seq
DB search
MNGIKADPDVLTPSGGGGFMDDEFYEDTGEMLMDKSGADKDVWVTRIPDWLYEAVSKWDD
LADGNDNDQIQIGEVVAFATTSGIDKSKQMRVFLNDRWRQKSKLPSSFQLEPASVSDTLL
KNTYVFTEKDLPGFKGQGYGYGRGNQQGGFGGVQDPKARIQKRSKYKKAIPKQTALIGHA
TRQYTANPLDTQEYQDFSAARIKQAIQGSHLTTIITKDTDVSDVNNSITLNNRFKNFIKP
TTKAKSQQNKAARMARSDLIDVLHSLFDEYQYWPMKAIKQRTKQPEQYLKEVLGDIALLV
KSGPFASNWKRQAVFENQRDISKQAEAAAPEGPGDGDSEGEDEMEDVV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcatcaaagcagaccccgacgttctgactccctcgggtggtggcggttttatg
gatgacgagttttacgaggatacgggcgagatgcttatggacaagagcggcgccgacaag
gacgtatgggtgacgcgcattccagattggctgtatgaggcagtctcaaagtgggacgac
ctcgccgacggcaacgacaacgaccagatacaaatcggagaagttgtagccttcgcgaca
acgagcggcatcgacaaatcaaagcaaatgcgtgtctttcttaatgaccgctggcgccag
aaatccaaactgccgtcttccttccagttggagcctgcatctgtttcagacacgctgctg
aagaacacatacgttttcacggaaaaggacctaccggggttcaagggccagggctacgga
tacggtcgaggtaatcaacaaggaggctttgggggtgttcaagatcccaaggcgcgcatc
cagaagcgcagcaaatacaagaaggccatccccaagcaaaccgcactcatcggccacgcg
acacggcaatacactgccaaccccctcgacacgcaggagtaccaagacttcagcgctgca
cgcatcaagcaagccatccagggttcccacctcacaacaatcatcaccaaagataccgat
gtctcagacgtcaacaactccattacgctcaacaacagattcaagaacttcatcaagccc
actaccaaggccaagtctcagcagaacaaagccgctcgtatggctcgatcagatctcatc
gacgttttgcattctctgttcgacgagtaccaatattggcccatgaaagctatcaagcaa
cgcacaaagcagccggaacaatatctcaaagaggtcttgggcgatatcgcgctccttgtc
aagtctgggccgtttgcgagtaactggaagcgccaggccgttttcgagaatcaacgcgat
atcagtaagcaggctgaggcagcagcgcccgaaggccctggtgacggagattcagagggt
gaagatgaaatggaggatgtagtttag
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integrated database retrieval system
