Pyrenophora tritici-repentis: 6345863
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Entry
6345863 CDS
T10215
Symbol
PtrM4_141000
Name
(RefSeq) RPB9, DNA-directed RNA polymerase, subunit M-Transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6345863 (PtrM4_141000)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
6345863 (PtrM4_141000)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Motif
Other DBs
NCBI-GeneID:
6345863
NCBI-ProteinID:
XP_001937923
UniProt:
B2WC82
LinkDB
All DBs
Position
8:<1669402..>1670369
Genome browser
AA seq
306 aa
AA seq
DB search
MAMDAKEIELRGKAIGKAVQEGEPSASILKLLNDLKTGVHATEDLLRSTRIGVTINRLRQ
HKDPAVQKLATELVSKWRDEVKKKQQPKKDGAVKVAANGGAASSPAPPASGTASPAPSQA
KKKHDVPADKRNHKTDNVKYQVTGSEARDACVRLMYDGLAYMSEAMPDEILLVAKQVEAA
AYTNAGSVNDGYKAKMRSLFQNLKSKSNPALRKRVLTGEVPAKRFVTMTHDEMKSDERRA
LDEKLKAENMNEAMVAQVEKAISKEFQCSKCKKKMVSYSQAQTRSADEPMTTFCECMNCG
NRWKFS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggacgccaaagagatcgagctccgcggcaaagccatcggcaaggcggttcaa
gagggcgaaccgagcgcctctatcctcaaacttctcaatgacttgaagactggcgtgcac
gcgactgaggatcttttgcgctccacacgtattggtgtcacgatcaaccgtctgcgccaa
cacaaggaccccgcagtgcagaaattggcgaccgagcttgtttcaaagtggagggatgaa
gtcaagaagaagcagcagccgaagaaggatggtgctgtaaaggtagccgcgaacggcgga
gcagcatcgtcgcccgctcctcctgcttcaggcaccgcgtctccagctcccagtcaagcc
aagaagaagcacgatgtacctgccgataagcgcaaccacaagacagacaacgtcaagtac
caggtcactggcagcgaggcacgcgatgcttgtgtcaggctgatgtacgacggattggcc
tacatgagcgaagcaatgccggacgaaatcctcttggtcgcaaagcaagtcgaagccgca
gcctacaccaacgccggtagcgtaaacgacggatacaaggccaagatgcgctctctattc
cagaacctgaagagcaaatcgaatcccgcgctccgcaaacgtgttctcacaggtgaggtg
cccgccaagcgatttgtcaccatgacacacgacgagatgaagtcagatgagcgacgagcc
ttggacgagaagctcaaggcagagaacatgaacgaggccatggtggcacaggtggagaag
gccatttcaaaggagttccagtgtagcaagtgcaagaagaagatggtcagctacagtcag
gcacagactaggtccgccgatgaaccgatgacgacgttttgcgagtgcatgaactgtggt
aataggtggaagttctcctag
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