Pyrenophora tritici-repentis: 6345882
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Entry
6345882 CDS
T10215
Symbol
PtrM4_140810
Name
(RefSeq) RpoA, DNA-directed RNA polymerase, alpha subunit- subunit
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6345882 (PtrM4_140810)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptrr03021
]
6345882 (PtrM4_140810)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
6345882 (PtrM4_140810)
RNA polymerase I system
RNA polymerase I
6345882 (PtrM4_140810)
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Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
6345882
NCBI-ProteinID:
XP_001937942
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All DBs
Position
8:complement(<1623160..>1624398)
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AA seq
376 aa
AA seq
DB search
MSTPSAEELMKRKTLGIGPETVTNQQSTDFPFHWPGENHEWNLDYFRDNFNVVFHKNDPL
DAQFSLTGIDTSVANAFRRILLSEIPTLAIEDVYIYQNTSIIQDEVLAHRLGLIPLCGDR
ATLRRMKWYAKPTDEDEGSGGPTSENTVALTLKTKCTWQPGGVARAVAGETDPDRLYVGH
NVYAKDMRFEPNGNQAENLSEAEGKHIRSTNPDILICKMRPGQELEIRMHAIKGIGQDHA
KFSPVATASYRLMPTIDITKPIVGADAKKFSRCFPSGVIRLDTVTSADIEKHPELEGKEG
EPKAVVANPMNDTVSRECLRHPEFKDKVKLGRIRDHFIFRVESTGQWESDELFLESVKLL
KIKCQRIKRGLDEMMK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaccaagtgcagaggagctgatgaagcgcaagacactcggcatcggcccagag
acagtcaccaaccagcagtctactgactttccattccactggcccggcgagaaccacgag
tggaacctcgactactttagagataacttcaatgtcgtcttccacaaaaacgacccattg
gatgcgcaattctctctcaccggcattgacacctctgtagccaacgccttccgccgcatt
ctgctctcggaaatccccacgctcgctatagaagacgtctacatctaccaaaacacgtcc
atcattcaggatgaggtgctcgcccaccgcctgggcctaattcccttgtgtggcgatcgc
gctacgcttcgccggatgaagtggtacgcgaagcccacggatgaagacgaaggctcagga
ggcccgacttctgaaaatactgtggcacttacactaaagacaaagtgcacatggcagccg
ggcggagttgcaagagcagttgcaggcgagacggacccagatagactctatgtgggacac
aacgtttacgccaaagacatgcgcttcgagcccaacggaaaccaagctgaaaatctctct
gaagcagaaggcaagcatattcggtccacaaacccggatattcttatttgcaagatgagg
ccaggacaagaacttgagattcgtatgcatgccatcaagggtatcggtcaagaccatgcc
aaattctctcccgtagctaccgcctcgtaccgactcatgcccaccatcgacatcacaaag
ccgattgtcggtgccgacgccaagaagttctcccgctgcttccctagcggcgtcatccgt
ctcgacactgtcacttccgcggacattgaaaagcatcccgagctcgagggcaaggaaggc
gagcccaaggctgtcgtcgcaaaccctatgaacgacaccgtcagcagagagtgcttacgg
catccagagttcaaggacaaggtcaaactgggtcgcatacgagaccacttcattttcagg
gtggagagcacgggccagtgggagagtgacgagctattcttggaaagtgtcaaattgttg
aagatcaagtgtcagaggatcaagagggggctagatgagatgatgaagtag
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