Pyrenophora tritici-repentis: 6345896
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Entry
6345896 CDS
T10215
Symbol
PtrM4_140630
Name
(RefSeq) VRR-NUC domain containing protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
6345896 (PtrM4_140630)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6345896 (PtrM4_140630)
Enzymes [BR:
ptrr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
6345896 (PtrM4_140630)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
6345896 (PtrM4_140630)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
6345896
NCBI-ProteinID:
XP_001937956
UniProt:
B2WCB5
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All DBs
Position
8:1588766..1591398
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AA seq
857 aa
AA seq
DB search
MALNPKSPSVHNQMIMRFIKHPKSTNFDGDEDRPVKRQKTANSPKKAPPTPRRTIKHETL
DSDDENEGTVFKEEAKEHKTDLESALPEVKSGDDAIEEYEAFKASQEEQTEGADERLEKR
TWVRGKSSLYVDAFNLALDTVLDEESHLFDEAETEVFRIWRDLDYEAQYLYVRLFLRKTS
AWHRIKNLGYHSDISDLQAAAEKLQRSYDLPAPSSKVETHPGEQDAPAGTTMGASFTFAD
RSEEEITTLEQASSLLKLDELKALAKDAKVKGKNKGELLKALRRTSKKQTGLSYFGLKRS
DSEMSRDSSTSRSRPETPDTEVEPGGDLSDDTNRDAHFTRRILQETGSCIRLSLTTLKLF
ERVHLVFYRSTEWTEKSLTTIILAKIARWNFPEYIVSRSTNIFASRSLLLEYEASIRTQH
RIDDILEFNGRSTEKDFQEIIDTFEEIYPRWQVLVREEQRKEESVYHSGEGSYLRRLSPA
WVYTRIIHKALDVLRRQKEHKREHKLLMELLDQRLFHHSRRGAWYQRKALLEEHYMAALT
EAGSRSVEKQKSHWKNIALQTCELGLQDNLVHIIHHYDLQKRITKLEKSLKFVKRLQHDF
SHVRLAKPIEVTMEGIRIERERPSISRRNSSPHPGRRGGKTIWIDPREDGECSVEAMCLS
QYRDQGWKGYHSEGGIIRTLFAYLFYDVLFTYIPNVFQTPYQTCPLDLHTDAFYPSRISE
INARLNEISNGDAPSIIQRVYDAHHERRTCIIGLDWTYGVSDLVEIAHCFDGDALATVCK
VMAQEYGQRGGGVPDLFLWKLPEEEGKKGEVKFAEVKSENDRLSDTQRMWIHVLSGAGVR
VELCAAVAKEVKVVSSV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaaccccaagagcccgtcagtacacaatcaaatgatcatgcggtttataaag
cacccaaaatccacaaacttcgatggcgacgaagatcggccggtcaaacgtcaaaagacg
gccaacagtcccaagaaagcgccgcctacaccacggaggactatcaagcacgaaacactt
gattctgatgatgaaaatgagggcacagtgttcaaggaagaggcgaaggagcataagaca
gacctagagagtgccctgccagaagtaaagagtggtgatgacgccattgaggaatatgag
gctttcaaggcatcacaggaagaacagactgaaggagcagacgaacgcttggaaaaacga
acctgggtgcgaggaaagagttcactatatgttgacgcgttcaatctggcattggacact
gtcttggatgaggaaagccatctgtttgatgaagctgagacggaagtctttcgaatatgg
agggatctggactatgaagcgcagtacctatacgtacgcctattcctacgcaagacatcg
gcatggcaccgcattaagaacctaggctatcatagcgatatatcagacctccaagctgca
gctgaaaaattgcaacgatcctacgatttaccagcgccatcctccaaagtcgagacacat
ccaggcgagcaggatgcaccggcagggacgacgatgggcgcgtctttcaccttcgccgac
cggtcagaggaggagataaccacacttgagcaggcttcctcgcttctcaagcttgacgag
ctcaaagctcttgcaaaggatgccaaggtcaaagggaaaaataaaggagaacttctgaaa
gcactgcgacgcacaagcaagaagcaaacaggcctaagctactttggactaaaacgttct
gactccgagatgtcgagagactcctctacgtctaggtctcggccagaaacaccagatacg
gaagtagagcctgggggtgatctctcggacgataccaaccgtgatgcgcattttacgcgc
aggatcctgcaagagacaggatcttgtattcgactctcattgactaccctgaagcttttc
gagcgtgttcatcttgtgttttatcgctccactgagtggactgagaagtcattgaccact
atcattctagcaaagatagcacgttggaacttcccagagtacattgtttctcggtccaca
aacatatttgcttcccgttcgttgcttctggagtacgaggcatctatacgtacccaacat
cggatagacgatatcctggagtttaacggaaggtccacggaaaaggatttccaggaaatc
atagacacgttcgaagaaatatatccacgctggcaagtgctcgttcgggaagagcaacgt
aaggaagaaagcgtatatcacagcggcgaaggctcgtacttacgacgtctatcgccagca
tgggtatatacgcgcattattcataaggcgcttgatgtactcagacgccaaaaagagcac
aagcgtgagcacaaactcttgatggaactgctagatcagagacttttccaccattcgcgg
agaggtgcgtggtatcaacgtaaagcgttgcttgaggagcattatatggctgcgctcact
gaagctgggagtagaagcgtggaaaaacagaaaagccactggaagaacatcgctttacag
acttgtgaacttggcttacaagataatcttgtgcatatcattcaccactatgatctccaa
aagcgtatcacaaaacttgaaaagtccctcaagttcgtcaaacgattacagcatgacttc
tcacacgtccggttggcgaagccgattgaagtcactatggaaggaatccgtattgagcgc
gaaaggccatcgatatctcgaaggaatagctcaccacatcctggcagacgtggtggtaag
acgatttggatagatcctcgcgaggatggcgagtgctcggtggaggcgatgtgtttgtca
caataccgtgaccagggttggaaaggctaccacagcgaaggtggcatcatccgcacgctc
ttcgcataccttttttacgacgtcttatttacatacatacccaacgtgtttcaaacgccg
tatcaaacatgtccgctagatttgcataccgacgccttctacccttcgcgtatatccgag
atcaatgcacgactgaacgagatatcaaacggcgacgcgccatcaatcatacagagagtt
tacgatgcccatcacgagcgccgaacatgtatcataggtctcgattggacatacggtgtc
tccgatttagtcgagattgcccattgcttcgatggtgacgcactcgcaacagtatgtaag
gtcatggcccaagaatatgggcagcgaggtggcggtgtacctgatttgtttctttggaaa
ctgccggaggaggaaggtaagaagggcgaagtcaagttcgcagaggtgaagagtgagaat
gatcgcttgagtgacacacaaagaatgtggattcacgtactttctggtgcaggagtgaga
gtcgaactctgtgctgccgttgcaaaagaggtaaaggttgtttcaagtgtgtga
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