Pyrenophora tritici-repentis: 6345903
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Entry
6345903 CDS
T10215
Symbol
PtrM4_140540
Name
(RefSeq) WD40 domain containing protein
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptrr03016
]
6345903 (PtrM4_140540)
Transfer RNA biogenesis [BR:
ptrr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
6345903 (PtrM4_140540)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
CPSF_A
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
6345903
NCBI-ProteinID:
XP_065960396
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Position
8:<1558422..>1560088
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AA seq
474 aa
AA seq
DB search
MAVPYQCLVARGSGDSSDWTLFGASGSKIFVQSSNGVTSTWPAQDVQTEGQQDDEDGERP
GKRIKLDQPKENKANFSSLIISNDGQYLVGITGEDKCVRVFQIDSQNSLQQLSERCMSRR
PSSITLTSDNMTILCADKFGDVYALPLLPSPEEEKVEQPEAPAAETEQKDWLPSATTLTV
HSGRNRKTLEEQLKQKAKGLAKSKEPMRFKHQLLLGHVSMLTDVVYAKVNGRSYIITADR
DEHIRISRGLPQAHIIEGFCFGHEAFISKLCLTPSGLLVSGGGDDHLYVWDWQNCALKEK
IAIRDSALAALQTQGLVAPGVDHASYKIAISGLWTLPTNGNNVDEILVACEGVPALFHFK
MGDAHANHIPLAGNALDVAMIQTPISPMCLIISIDNIHKAGSTTEVRDDKVPRLQYFSRQ
ADGEWVEDAHIATALSGFAHGKEADSNGLDAGESVVRSMLYNVENLRKRPGADD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccgttccttaccagtgtcttgttgcgcgagggtcgggagattcaagtgactggacg
ctttttggtgcgagtggctcaaaaatcttcgtccagtctagtaacggagtcacatcaaca
tggcctgcgcaagacgtccaaactgaaggccagcaggatgacgaagatggagaacgtcca
ggaaaacgtatcaagctggatcagccaaaagaaaacaaggcaaatttctccagtttgatt
atatcaaacgacgggcagtacttggttggtatcactggcgaggacaagtgtgtccgcgtc
ttccaaatcgactcccagaactcgctgcagcagctaagcgaaagatgcatgtcaagaagg
ccttcttccatcactcttacgtcagataatatgacaatattgtgtgcggacaagtttggg
gacgtatacgctctgccactcctcccatcacctgaagaggagaaggtagaacagcccgag
gcgcccgcagcagaaaccgagcagaaagactggctgccatcagctactacgttaacagta
cactctggcaggaaccgtaagaccttggaagaacagctcaaacagaaagccaaggggctt
gcaaaatccaaggagcctatgcggttcaaacaccaacttctccttggccatgtctccatg
ctcacagatgtcgtgtatgcgaaggtcaatggccgaagctacatcataacagcagatcgt
gacgagcacatccggatctcacggggcctgccgcaagcacatattatcgagggcttctgt
ttcggacacgaggcgttcatcagcaagctttgccttacaccgtctggtctacttgtatct
gggggtggagatgaccatctctacgtatgggactggcaaaattgcgcattgaaagagaag
atagccattcgggattccgcacttgctgccctccagacacaaggactggtggcaccagga
gtcgaccacgcaagctacaaaatcgcgatttccggactttggactttgccaacaaacgga
aataatgtcgacgagattcttgtagcatgtgagggtgtgccagcgctgttccacttcaaa
atgggcgatgcacatgcaaaccatattcccctagccggcaatgcgctggacgtagccatg
atccaaacgccaataagcccaatgtgcctgattatctcgatagataatattcacaaggca
ggctcgacgacagaagtccgagatgacaaggtgccgagattgcaatacttctctagacag
gcagatggcgaatgggtagaagatgcgcatatcgcgacggcattatcgggcttcgcgcat
ggtaaggaagcggacagtaacggcttggacgcgggcgaaagcgtagtccgaagcatgctc
tacaatgttgaaaacctgagaaagcggccaggtgctgatgattag
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