Pyrenophora tritici-repentis: 6346209
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Entry
6346209 CDS
T10215
Symbol
PtrM4_137070
Name
(RefSeq) RNA1, Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport
KO
K14319
Ran GTPase-activating protein 1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6346209 (PtrM4_137070)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6346209 (PtrM4_137070)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
6346209 (PtrM4_137070)
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Paralog
GFIT
Motif
Pfam:
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_MHP1-HER1-GIP3
DUF604
Motif
Other DBs
NCBI-GeneID:
6346209
NCBI-ProteinID:
XP_001938266
UniProt:
B2WD75
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All DBs
Position
8:complement(<681405..>682746)
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AA seq
427 aa
AA seq
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MAGAKVFSIEGKGLKLTTAEDIEPHIQDLKSNDSVEEIKFLGNTLGIGASEALAKVLESK
KNLQIANLADIFTSRLLSEIPPALSHLLTSLLTLPNLHTVDLSDNAFGLNTVAPLVDFLS
QHTPLRYLYLNNNGLGPAAGVLVADALTALAAKKEAARKQGKDVPDLELVICGRNRLENG
SMAAWAKAYAANKGVKTIKMTQNGIRQEGISHLITNGLAHLTQLDTLDLQDNTFTAMGAN
ALSKAVGNWTELRELGVGDCLLSGRGGIALAAALEKGNNKKVEVLRLQFNDINAKGLAGL
ASASSTALPLLRRVEINGNKFDEEDPSIEKLRDVLDARKEESGKHADDEEYWGLDELDEL
EDESEDEEESDEEGKKGDDDDEAGVEVEQKAARQIADDNKAEEANVPQDKDKKVDDLADL
MSKTEIK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgcaaaggtcttttctattgagggcaagggcctcaaactcaccactgcagag
gatattgaaccccacattcaggacttgaagagtaatgacagtgtggaggagattaaattt
ctaggaaacactctaggtattggggcgagtgaagcgttggccaaggtccttgagagcaag
aagaacttgcaaatcgccaatcttgccgacatcttcacctcacgtcttctctctgagatc
ccacctgcgctgtcacatctacttacttcgctccttaccctaccaaacctgcacacggtg
gacctctccgacaatgcgtttggtctgaacactgttgcaccgctagtcgacttcttatcg
caacatacgccacttcgctacctctacctaaacaacaacggtctcggcccagctgctggt
gtgctcgttgccgatgcgctcactgcgcttgccgcaaagaaggaagccgcacgaaaacaa
ggcaaggatgtaccagatctcgagctcgtcatctgtggtcgtaaccgattggaaaacggc
agtatggccgcatgggcaaaagcctatgcagccaacaagggagtcaagaccatcaagatg
acacaaaatggtatccggcaggaaggtatctcacatctcatcacaaacggcctggcccac
ctcacccagcttgacacgctcgatctccaagacaacaccttcacagccatgggcgcaaac
gccctcagcaaagccgtgggcaactggaccgaactccgcgaactcggcgtaggcgactgc
ctcctcagcggccgcggtggtatcgcccttgccgctgccctcgaaaaaggcaacaacaaa
aaagtcgaagtgctccgcctccaattcaatgatatcaatgcaaaaggtctggctggtctc
gcctccgcttcctcaactgcacttcctctgctccgccgtgtagaaatcaatggtaacaag
tttgacgaagaggaccccagtatcgagaaacttcgcgatgtgctcgatgcacgaaaagaa
gagtcggggaagcatgctgatgacgaggagtactggggtcttgatgagctggacgagctt
gaagacgagagcgaggatgaagaggagagtgatgaggaggggaagaaaggtgacgacgat
gatgaggccggtgtggaggtcgagcagaaggctgccagacaaattgcagatgacaacaag
gccgaggaggccaacgtgccgcaggacaaagataagaaggttgatgatttggccgatttg
atgagtaagacggagattaaatag
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