Pyrenophora tritici-repentis: 6346216
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Entry
6346216 CDS
T10215
Symbol
PtrM4_136990
Name
(RefSeq) Superfamily II helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
Enzymes [BR:
ptrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6346216 (PtrM4_136990)
Spliceosome [BR:
ptrr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6346216 (PtrM4_136990)
Complex C
U5 SnRNP specific factors
6346216 (PtrM4_136990)
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GFIT
Other DBs
NCBI-GeneID:
6346216
NCBI-ProteinID:
XP_065960243
UniProt:
A0A834RN62
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Position
8:662372..669049
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AA seq
2185 aa
AA seq
DB search
MSKDQNNLAQFKYAAMSNLVLQVDRRFTNPRRPDEHTGDPESLAGRINIRDMGGRTGRDS
ANAQAKKLKGPGVERGNLGEGGDVLEREQRKRKRDDGTSGFGAIATADLNIEGLTYKPRT
PATRQTFEFITTIVSRALGDVDPATTRSAADQVLEYLKDDNMKDFDKKKEVDDLLGTSMG
AKEFNELVNLGKKITDYDAQDEDEGGDEEMADGEGADNGDNQGVAVVFDDEEEDEDGPQT
FEVRDGDSSDEDEAAAPIEQIGEDQDMKGGGFVDTEETIIQGDTAAADAKSATDQLIPAH
EIDAYWLQRQIGQIYEDAHIQQEKTRDALKYLAGVSDDGEEKELREIENDLMDLFDYEHH
ELVAKLVLNRDRVVWVTRWRRAAEDNDERTAVEREMKAAGQQKILQELRARETGIKAEDG
AGAGKMKFNLKDISLPEPSNDVEMADAKPEGIVGGLQPSSRLVNLDNIVFDQGNHLMTNA
SVKLPQGSTRRQFKGYEEIHVPAPKAKRDPNEPALMPTSELPDWARVGFGNSKSLNRIQT
KCFPTAFNDDGNMLICAPTGSGKTNVAMLTMLREIGKHRNPQTGEIALDDFKIIYIAPLK
ALVAEQVGNFGKRLEPYGIKVSELTGDRQLTKQQIAETQIIVTTPEKYDVITRKATDTSY
INLVRLICIDEIHLLHDDRGPVIESIVSRTLRRSEQTGDQVRIVGLSATLPNYRDVASFL
RVDPDKGLFHFDATFRPCPLKQEFIGVTDKKAIKQLKTMNDVCYTKVLEQVGEHRNQMLI
FVHSRKETAKTAKYIRDKALEEESIGKILRSDAASREILREESESVQNADLKDLMPYGFG
IHHAGMSRADRTSVEDLFADGSIQVLVCTATLAWGVNLPAHTVIIKGTQIYSPEKGSWVE
LSPQDVLQMLGRAGRPQYDTYGEGIIITTQAEIQYYLSLLNQQLPIESQLVSKLADNLNA
EVVLGNVRNRDEAVDWLGYTYLFVRMLRSPALYRVGPEYENDTVLEQRRVDLVHAAAHVL
EKCSLIKYDRKTGALNPTELGRIASHYYITHNSMATYNMHIQPGISAIELFRVFALSEEF
KYIPVRQDEKIELAKLLGKVPIPVKEGVEEAQAKINVLLQAFISRLKLEGLALMADLVYV
TQSAGRILRAIFEICLKKGWSQVAKLALDMCKMAEKRMWPTMTPLRQFPTCPRDIVQKAE
RIDVTWPSYFGLDPPSMGELLGMPKAGRLVCGLVEKFPRLQIEATPRPVTRSLLRLELTI
RPDFTWDTELHGASEAFWILVEDCDGEQILFHDTFILRRDYSDGDANEHIMELTVPIDDP
MPPNYFITVLSDRWMASETKLAVSFQKLILPAKFPAHTPVLDLQPLPVSALKRKEYMGLY
ENVGRFNKVQTQTFNTLYTTDDNTLVGAAAGIGKTICAEFAILRHWATDNEGRIVYLAPF
QELVDNQYKNWNERLSGLSGGKDIVKLTGETTADLRLLEKGDLILATPSQWDSLSRQWQR
RKNVQSVALLIADELHMLGGSNGHVYEIVVSRMQAMAIQIESKLRIVGLAVSLANARDIG
EWIGATKHTIYNFSPAIRAVPLELKIQSFTIPHFPSLMMAMARPTYSAITQMSPDKPAMI
FVPNRKQARNSASDLFNACVADENEDRFLNVELSEIQPILEKINEHSLAESLSHGIGYFH
EALNTFDKRAVQHLFKVGAVQVMIVSRDSCWEVDSSAHLVVVQGTQFYEGREHRYVDYPI
SDILQMFGKAGRVGVDKSAKGVLMLPAVKREYYKKFLNEALPIESHLPDYLHDAFVAEIS
AKTIESTQEAVDWSTYTYFYRRLLANPSYYNLHSTSHEGLSAHLSDMVEQTLKELTDAQL
IEHDEDEDSITPLNPCMIAAYYNISFITMQTLMMSLNGRTSLKGVLEIITAATEFEDIQI
RRHEDHILQRIYDRVPFKMAEPNFETPHFKAFVLLQAHFSRMQLPIDLAKDQETVLRKVL
NILSASVDVLSSEAHLNAMSAMELSQMVVQAMWQKDSPLKQIPHFDADTIKAAQKFDIND
VDDFINAMDPDENPDYKKLIAALNVDQRQLADIANFTNNFYPNVELELELVDPENIASNS
PAQLKVRVTRNIEEDEELKTEVHAPFYPVDKTESWWLVVGDQKERTLLAIKKVPILRKLQ
TVLEFTLEKPGKHELNCYLDVKPAI
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaccagaacaatttggcacagttcaaatatgcggccatgtccaacttggtc
ctgcaggtggacaggcgcttcacaaacccgcgccgaccggacgagcacactggcgatcct
gagtcgctcgcaggccgcattaacatccgagacatgggaggacggacaggtcgtgacagc
gcaaatgcgcaagcaaagaagctcaagggacctggtgtcgaacgaggaaacctgggtgaa
ggtggcgacgtgctggagcgtgagcagcgaaagagaaaacgggacgacggtacaagtggg
tttggagctatcgctactgccgacttaaacatcgaaggcctcacatacaagccacggacg
cctgcgacccgccagacgttcgagtttatcaccaccattgtgagcagagctctcggcgat
gtcgaccccgcgaccacgcgaagtgcggccgaccaggtcctcgagtatctcaaggatgac
aacatgaaggactttgacaagaagaaggaagtggacgatctcctcggaacctccatgggc
gcaaaggaattcaacgagcttgtgaacctgggcaagaaaatcacagactacgatgcgcag
gacgaggatgagggaggcgatgaagagatggccgatggtgagggtgccgacaatggcgac
aaccaaggtgtagctgtcgtgttcgacgatgaagaggaagacgaagacgggccccagacg
ttcgaagtccgagacggtgatagctcggatgaagatgaggcagcggcgccgattgagcag
attggagaggatcaggatatgaagggtggaggctttgtggatacagaagagacgataata
cagggcgacacagctgctgcggatgcgaagagcgccacagaccaactcattcctgcacac
gagatcgacgcgtactggttacaacggcagattggacaaatatacgaggatgcgcatatc
cagcaagagaagacacgggacgcgctcaagtatcttgcaggagtctctgacgacggcgaa
gagaaggagctgcgcgagatcgaaaacgacctcatggacctgtttgattacgaacaccac
gagctggttgcgaaacttgtgctcaaccgcgatagggttgtctgggtcacaaggtggcga
agagctgcagaggacaacgacgagcggacggcagtcgagcgggagatgaaagctgcgggg
cagcaaaagatcctgcaagagctgcgcgcacgagagactggtatcaaggctgaggatggc
gctggcgctgggaagatgaagttcaaccttaaggacatcagcctcccagaaccctcgaac
gatgtggagatggctgatgcgaagcctgagggcatcgttggcggcctgcaaccatcgagt
cgacttgtcaacctggacaacatcgtttttgaccagggaaaccatctgatgacaaacgct
agcgtaaagctgccacaaggctctacgcgacgacagttcaagggctatgaggaaattcac
gtacctgcaccgaaagcgaagcgcgaccccaacgagccggcattgatgcctacctctgag
ctaccggactgggcacgagtgggtttcggcaactcgaaatcgctcaatcgtattcagact
aagtgtttcccgacagccttcaatgatgacggaaacatgttgatttgcgcgcccaccgga
tccggaaagaccaacgttgcaatgttgactatgctccgagaaatcggcaagcatcgcaac
ccacagaccggcgagatcgcactagacgacttcaagatcatttatatcgctccgctgaag
gctttggtggctgaacaagtcggtaactttggcaagcgtctcgaaccctatggcatcaag
gtttctgagcttactggtgatcgccagctcaccaagcagcaaattgcagagacccagatc
atcgtcaccacccctgaaaagtacgatgtcatcactcgtaaagccactgacacgagctac
atcaacctggttcgtctcatctgtattgacgaaattcatcttcttcacgacgaccgtggt
ccagttatcgagagcatcgtcagtcgaacccttcgacgcagcgagcagactggtgatcaa
gtacgcattgtaggattgagtgctactcttcccaactaccgtgatgtggcgagctttctc
cgtgtggaccccgataagggtctgttccactttgacgccaccttccgtccttgtccgctt
aagcaggagtttattggtgtcacggataagaaggcaatcaagcagctcaaaactatgaat
gacgtctgctacaccaaagtactggagcaggtcggtgaacaccgcaaccagatgctgatt
ttcgtacactcgcgaaaagagactgcgaagacggcaaagtacattcgtgacaaggcactg
gaggaggagtcaataggcaagattcttcgatcagatgctgccagccgagagatcttgagg
gaggagtcagagtcagtacaaaacgccgacctcaaggatcttatgccatatggttttggt
atacatcacgctggtatgtcccgagcggatcgtacttccgttgaggacttgttcgccgac
ggctccattcaggtccttgtttgcacagcaacattggcttggggtgtcaacttgcctgcg
cataccgtcatcatcaagggaacgcagatttactctcccgagaagggtagttgggtcgaa
ctaagtccacaggacgttttgcagatgttgggtcgtgccggtcgacctcagtacgatacc
tacggagagggtatcatcattaccacacaagccgaaatccaatactacctgtcgctgctt
aatcaacagttgcctatcgaatcgcaactggtcagcaagcttgcagataatctcaacgcc
gaggtcgtgcttggaaacgtacgtaacagagatgaagcggtggactggctcggttacaca
tacctcttcgtcagaatgcttcgatcaccggctttgtaccgtgtgggcccggagtatgag
aatgatactgtactagagcagcggcgagtggaccttgttcatgcggctgcacacgtcctg
gagaagtgcagtctcatcaaatacgacaggaagactggagcgttgaacccgaccgagctt
ggaaggatcgcttcccattactacatcactcacaactccatggcaacgtacaacatgcac
atccagcctggtatcagtgctattgagttgttccgggtgtttgcactcagcgaggaattc
aagtacatccccgtccgtcaagacgagaagatcgagcttgcgaagctactaggcaaggtc
ccgattcctgtcaaagagggcgtcgaagaggcccaggccaagatcaacgttcttcttcaa
gcttttatttctcggctcaagctggaaggactagcgctcatggctgatctggtctacgtc
acacagtcggctggacgtatcctgcgtgcaatcttcgagatttgcctcaagaagggctgg
tctcaggttgccaagttggctcttgacatgtgcaagatggctgagaagcgtatgtggcct
acgatgacgccacttcgacagttccccacttgcccaagggacattgtgcagaaggcagag
cgtatcgatgtcacatggccaagctattttggccttgacccgccaagcatgggtgagcta
ctaggcatgcccaaggctggcagacttgtgtgtggtttggtagagaagtttccacgccta
cagatcgaggccacaccgcgaccggtgactaggtccttgctccgcttggaactcactatt
cgacccgactttacctgggacacggagttacatggagcctcggaagctttctggattcta
gtagaggactgtgacggcgagcagattttgttccacgacaccttcattctccgacgggac
tactctgatggtgatgccaacgagcacatcatggagctgacggttcccatcgatgacccg
atgccacccaactacttcatcactgttctctcagatcggtggatggcatctgagacaaag
ctcgctgtgtctttccagaagctcattcttccagccaagttccctgcccacacccctgtc
ttggacctacagccactgccggtttctgccctcaagaggaaagaatacatgggcttgtac
gagaacgtcggccgcttcaacaaggttcagacgcagacattcaacacgctgtacaccaca
gacgataacactcttgttggcgcagctgcaggtattggcaagacgatctgtgctgagttt
gctatcttgcgacactgggctaccgacaatgagggtcgtattgtgtacctagcaccgttc
caggagctcgttgacaatcagtacaagaactggaacgagcggttatccggtctcagtgga
ggcaaagatattgtcaagctcactggcgaaaccacagccgatctccgattgctcgagaag
ggtgacctcatcttggctacaccttcacaatgggattccctctctcgccagtggcaacgc
aggaagaacgtccaatcggtagctctgttgattgctgatgagctacacatgctcggtggt
tcaaacggccatgtctacgagattgttgtttctcgtatgcaggcaatggcgatacagatt
gagtctaagctgcgcattgtaggcctggctgtctctctggcaaacgcacgggacattggc
gagtggatcggcgcgaccaagcacactatctacaacttcagcccggctatccgagcagta
ccactggagctgaagattcagtccttcaccattcctcatttcccatctttgatgatggct
atggcgaggccgacttactctgctatcacacaaatgtctcccgacaaaccggctatgata
ttcgtccctaacaggaagcaagctcgaaattccgcctccgatctcttcaacgcttgtgtt
gccgacgagaacgaggatcgtttcctcaatgttgagctgtcggaaattcaaccgatcctt
gagaagatcaacgaacactcactcgcggagtcgctgtctcacggtattggttacttccat
gaggctctcaacactttcgacaagcgggctgttcagcatctgttcaaggtcggtgctgta
caagtcatgattgtgtcacgcgattcctgttgggaggttgacagcagcgctcatctcgtc
gttgttcaaggcactcagttctatgagggacgtgaacaccgatatgtggattaccccatc
agcgacatactacaaatgttcggcaaagctggtagagtcggagtggacaagtctgccaag
ggtgtactcatgcttcctgcggtcaagcgcgagtactacaagaagttcttgaacgaggca
ttgcctatcgagagtcatctccccgattaccttcatgatgcctttgtcgccgaaatcagc
gcaaagacgatcgaatccacacaagaggctgttgattggtcaacatacacgtacttctac
cgtcgtctgctagccaatcctagctactacaacctccacagcacttcgcacgaaggtctc
agcgcgcatctgtcagacatggttgagcaaacgctgaaggagctgacggatgcccagctg
atcgagcacgatgaggatgaagactccatcacgcctctcaacccatgcatgatcgccgcg
tactacaacatctccttcattaccatgcagactctgatgatgtctctcaatggcaggacc
agcttgaagggtgtgctggagattatcaccgccgccacagagttcgaagatattcagata
cgaagacacgaggaccacatcttacaacgcatctacgaccgcgttccttttaagatggcc
gagcccaacttcgagacgccgcatttcaaggctttcgtcttgcttcaagctcacttctcg
cgcatgcagctcccgattgatctggccaaagaccaagaaaccgtgctgcgaaaggtgctc
aacatcctcagcgccagtgttgatgtcctctcgtccgaagctcacctcaacgccatgtct
gccatggagctctcacagatggtggtccaagcaatgtggcagaaggactcaccactcaag
caaatcccccacttcgacgccgacacgatcaaggcagcccagaaattcgacatcaacgac
gtcgacgacttcatcaacgccatggatcccgacgagaacccagactacaagaagctcatt
gcggccctgaatgtcgaccagcgccaactcgccgacattgcaaacttcacaaacaacttc
taccccaacgtcgagctcgagctagaactcgtcgatccagaaaacattgcctcgaattcg
cccgcccaactcaaagttcgcgtcacacgcaacattgaggaggacgaggaactcaagaca
gaagttcacgcgccgttctatcctgtcgacaagacggagagttggtggctggtcgtcggt
gaccagaaggagcgcacgctgttggccatcaagaaagtgcctatcctgcgcaagttgcag
accgtgctcgagtttacgctggagaagcctggcaagcatgagttgaactgctatcttgac
gtgaagcctgcgatctga
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integrated database retrieval system
