Pyrenophora tritici-repentis: 6346273
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Entry
6346273 CDS
T10215
Symbol
PtrM4_136460
Name
(RefSeq) HepA, Superfamily II DNA-RNA helicase, SNF2 family
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6346273 (PtrM4_136460)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
6346273 (PtrM4_136460)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
DUF5884
Motif
Other DBs
NCBI-GeneID:
6346273
NCBI-ProteinID:
XP_065960226
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All DBs
Position
8:519942..523442
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AA seq
1166 aa
AA seq
DB search
MYRRDPIVSSSPPPTISRAASHGNDEANDTYVTQPTQILGERSPFFAAPSDSTQPTLIVT
PRANRVQSTVSSQLQVPRSSPTRYSSPVMSPQSQRPYMGYSNPMAPPGTSFFPPQAVRKP
IHDITSDDDPPVERDPDEEESEFRSNIPLSKIEMVSMTSRVEETPQKPMFDLSGYKYSGD
DSRKRPSDRYGSSTPPKRQKAVPQGRPSRAMPVDLTRDDEMTLDDIKDVTMKHATQQLKN
VYHLRTVKQVYEALVMKKGNVQDASTYLADQESDDELLQLPQFGVAQPKSNPVVKKTAQR
VLKQPVKSLQDKYSKLGATQTAPVVIDSPEREQPRKRGRLVKGTDRKGRVAFSPSPDASP
QRPQPPKKQAPIVVSSDEDEGIDAAHVIDDDDPDASMAAENSFDEKALLNFFNTCSVEAM
VDLSGHKEEDIQEIFQQRPFASLDAVRKVHADLAPVEKGKKKARKPRITTGTRLVESTEG
MWNAYSTIDSVVKQCEVLGKPMIAGMARWGIDIFGASTEEGMDVTSLDDSSDTSSARDSG
YHTPRSPNGSDTELQSVRKAASRTKLLKQPAIMNDDIELKDYQVVGLNWLNLLWQTKTSG
ILADDMGLGKTCQIIAFLSHLKEQNGGKPALIVVPGSTLENWCREFERFSKTIHFTPYYG
SQAERFLHQDSILENIRQGTCDVIITTYDLTFRKDDLVFLKRCRPEICIFDEGHMLKNAN
TIRYKSLMKIPTPCRILLTGTPLQNSLQELMSILGFLMPKVFYGDQQEEVQEMLQILFKH
KAKTMESDSHSSLLSAQRIQRARTMLMPFILRRKKAQVLKHLPKKTSRVEYCDLTDTQRT
LYNEQLAKQRKILEDRAAGIPVKDHANVMMKLRQAAIHPLLFRHRYDNDKIRKMAKACLK
EETFAESNPDIIYEELELYQDYQCHQLASKYRALKKFELQNHEWMDSGKVAKLLALLKKY
KENGDRALVFSQFTSVMDILGWVFDDHDINFMRMDGSTPIQERQSLMDVFYQDESIQLFM
ISTKSGGAGINLACANKVIIFDSSFNPQDDIQAENRAHRVGQTREVEVVRLVTKDTVEEQ
IYALGVSKLELDKMVQGEEGEDKGKGKKKDTTALSKAEEAGIEAVELMMMQQLKSPEEKS
DKDMGKGDVKELYLDGLKKAGLDVAA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtcgcgatcctatagtctcgtcttcaccaccgcctactatatcacgcgctgct
tcacatggcaacgacgaagccaacgacacctacgtcacccagccgacgcaaatcctcggt
gaacgctcgcctttctttgctgcgccatctgatagcacccaacctactcttatagtcact
ccgcgcgcaaacagagtccaaagcaccgtttcttcgcaattgcaagtcccgcgctcgtcg
cctacccgctactcttcgcccgtcatgtcgccccagtcgcaacgcccgtatatgggctat
agcaatccaatggcgccgcctggcacgagcttctttcctccacaagccgttcgcaagcca
atccacgacattacctctgacgacgatccacctgtcgaacgcgacccggacgaagaagag
tctgagttcaggtcgaacatacccctgtctaagattgagatggtttcaatgacgtcgaga
gttgaggagacaccgcagaagccgatgttcgatttatcgggatacaaatacagcggcgat
gattcacggaaacggccgtctgatcgctacggttcaagtacgccaccgaagaggcaaaag
gcagtgccgcaaggacgtccttcgcgtgccatgccagtcgacttgaccagggacgacgaa
atgactctggacgatataaaagatgttactatgaagcacgccacgcaacaactaaaaaac
gtatatcacttacgtacagtgaagcaggtgtacgaggcgctggtcatgaagaagggcaat
gtccaggatgcttccacatacttggcagaccaagagtccgacgacgagttgcttcaactt
cctcagtttggtgtagctcagcccaagtcaaatccggttgtcaagaagactgcccagcgt
gtattgaagcagccagtgaagtcattacaggacaaatactcaaagctgggagcaacgcag
actgccccggtcgtcattgatagccctgagagggagcaaccgaggaagaggggtcggctc
gtcaagggaacagataggaaaggcagagtcgccttttcgccctcaccagacgcttcaccg
cagcgcccgcaaccgcccaagaagcaagccccaatcgttgtctcttcggacgaggatgag
ggtattgacgccgcgcatgttattgacgatgacgacccggacgcaagcatggcggcggag
aatagtttcgacgagaaagctctcttgaacttcttcaacacttgttcagtcgaggctatg
gttgatctgtccgggcacaaggaggaggacatacaagagatattccaacaacgtcctttt
gcttcgctcgatgccgttcgtaaagttcatgccgaccttgcaccagtcgagaagggaaag
aagaaggctcgtaagccgcgaataacaaccggtacgcgccttgtggagtccaccgagggt
atgtggaacgcatactctactatcgactcagtcgtcaagcaatgtgaagtccttggaaag
ccaatgattgcaggaatggctcgatgggggattgacatttttggtgcttcgacggaggaa
ggcatggatgtaactagtctcgacgatagcagcgacaccagctctgcgcgagactcaggt
tatcacacgccgcggagtcccaatggcagcgatacggagttacagagcgtacgcaaagca
gccagccgtacgaagctactgaaacagcctgccatcatgaatgatgatatcgagctcaaa
gactatcaggttgtcggtctcaactggctgaatcttttgtggcagacgaagacatctggt
attttggccgacgacatgggtctgggcaagacatgccaaattattgcgtttttatcgcat
ctgaaagagcaaaacgggggcaaacctgcgcttattgttgtaccaggatcgactttggag
aactggtgtcgtgaatttgagcgcttctcaaagaccatccactttacgccatactacgga
tcacaagcagagcgctttttgcaccaggacagcattcttgagaatatccggcagggcacg
tgtgatgtgatcatcacaacgtacgacctgacgtttaggaaagacgatcttgtcttcctc
aagaggtgccgacctgagatttgcatctttgacgaaggccatatgctgaagaatgccaac
acgatccgatacaagagcttgatgaagatccctactccctgtaggatcttgttgactggt
acgccgctgcagaacagtcttcaagagctcatgtcgatccttggtttcttgatgcccaag
gtcttctacggagatcagcaagaggaagttcaggagatgttgcagattttgttcaaacac
aaggccaagactatggagagcgactcgcatagctctttactgtctgcgcagcgtatccag
cgtgctcgtacgatgttgatgccgtttattctccgacgaaagaaggcacaggtgctcaag
catctcccgaagaagacttcacgcgttgagtactgcgacctcaccgatacccagaggacg
ctgtacaacgagcaactagccaagcagcgcaagattctcgaggaccgagccgctggcatt
cccgtcaaggatcacgccaacgttatgatgaagcttcgtcaagcagctattcatcctcta
ctctttcgtcaccgttacgacaacgataagattcggaagatggccaaagcctgtctaaag
gaagagacctttgccgaaagcaacccggacatcatctacgaagagctagagctctaccaa
gactaccaatgtcaccagcttgcttccaagtatcgcgccctcaagaaattcgagctccaa
aaccacgaatggatggactccggcaaggtcgccaaactccttgcgctactgaagaaatac
aaggaaaacggcgatcgcgccctcgtcttctcgcaattcacgtccgtcatggatatcctc
ggctgggtctttgacgaccacgacatcaatttcatgcgcatggacggctccactccaatc
caagagcgccagtctttgatggacgttttctaccaagacgaatcaatccagctcttcatg
atcagcacaaagagcggtggtgcaggtatcaacctcgcctgtgctaacaaagtcatcatc
ttcgactcgtcgttcaacccacaagacgacatccaagccgagaaccgtgctcaccgcgtc
ggtcaaacgcgcgaggtggaagttgtacgacttgtaaccaaggacaccgtcgaagagcag
atctacgctcttggcgtgagtaagcttgagctagataagatggtgcagggagaagaaggc
gaagataaaggcaagggcaagaagaaagataccaccgctttgagcaaagccgaggaagcc
ggtatagaagctgttgagttgatgatgatgcagcaactcaagagtccggaggagaagtca
gataaagacatgggaaaaggagatgtcaaggagttgtacttggatggcttgaagaaggcg
ggtttggatgttgcggcttga
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