Pyrenophora tritici-repentis: 6346373
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Entry
6346373 CDS
T10215
Symbol
PtrM4_135270
Name
(RefSeq) WD40 repeat protein
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04145
Phagosome
ptrr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
6346373 (PtrM4_135270)
09142 Cell motility
04814 Motor proteins
6346373 (PtrM4_135270)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6346373 (PtrM4_135270)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptrr04812
]
6346373 (PtrM4_135270)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
6346373 (PtrM4_135270)
Cytoskeleton proteins [BR:
ptrr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
6346373 (PtrM4_135270)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_SPT8
Rrn6_beta-prop
Motif
Other DBs
NCBI-GeneID:
6346373
NCBI-ProteinID:
XP_001938427
UniProt:
A0A834RMM1
B2WDN6
LinkDB
All DBs
Position
8:148020..150461
Genome browser
AA seq
699 aa
AA seq
DB search
MQQRREEILAKKAKLAELKRQRELRRAESASRQSMTGSPLGEVLSPTPRRSEDLDRRTDV
TNLINSILGESRPGSTQPGSPAGPGRATRPTSVVSAGQLSSDNESSSFHPSAGMVDREMQ
TLSIGPLATVYEFDGQVTNEVKKEKEIITYSKGVQACIDWSPSKDRGVGGSDTERDESPT
RSPKSKRLSRRQKEKDEEIRLQLRREIEEEIKAAQQAPQDGAPQPGSEENFPFKTLSNEE
LTAVENSEEFIGFVERSTKVLERALDQQLGYDILADYANGGVGVDDDDEGYGSSGGKKGR
RIKEIAQFWDERWSKKRMISDLGFSTKFPELVLASYTKNPSAPHDPDGLVQVWNLHMHDR
PEYIFHAQSDILTAKFSPFHPNLIVGGAYSGQVLLWDTRAKSAPVQKTPLTGSGHTHPVY
SLDIVGTQNANNIISCSTDGVVCGWTVDMLSQPQEFLELTSPPPAKTDDMAVTAIAFPQS
DPTYFLAGTEEGSIYPCHRYDRAGAKAGVDGRVKYAGHAAPVMSLDFHPAKGQIDLGDLV
LSSSVDWSVKLWKVRPPAATGATNPTLPGATQQVTPVLDIAREDLVYDVRWSPVKPSVFA
LVDGAGSLEVWDINVDIEVPVQSVKPSDGKRGAFTNMPTGLGYMNRSLNKLAWERNEGRR
VAVGGMDGVVTVFERSGMERAERIIVIIILYGTAGLWEE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacggcgggaggagattctcgccaaaaaggccaaactcgctgagctgaagcgc
cagcgcgaactgaggagagccgagagtgcgagcagacagtccatgactggtagtcctttg
ggagaagtcctttcgccaacacccagacgcagcgaagatctcgaccgcaggaccgatgtc
accaacctcatcaatagcattctgggggaaagcaggcccggctccacccaacctggctct
ccagcaggccccggccgagcgacccggccaacttcagttgtcagtgcaggtcaacttagt
agcgacaatgagtcgtcgagcttccatccctcggccggtatggtcgaccgagagatgcag
acgctctccataggcccgttagcgacagtgtacgagttcgatggccaggtgaccaacgaa
gtcaagaaggaaaaggagatcatcacgtacagcaagggtgtgcaggcatgcatagactgg
agtccgtcaaaggacaggggtgttggaggtagtgataccgagcgtgacgagagccccacg
cgctcacccaagagcaagaggctgagtcggagacaaaaggaaaaggacgaggagattcgg
ttgcagctgcgcagggagattgaggaggaaatcaaagccgcccaacaagcgcctcaggat
ggcgcaccgcaaccaggctcggaagaaaacttcccatttaagacgcttagcaacgaggaa
ttgaccgccgtggagaactcggaagagttcattggcttcgtggagcggagtacaaaggtc
cttgaacgagcgctcgaccagcagttgggatacgatatcctagcagactatgcaaatggt
ggtgtgggtgtcgacgatgacgacgagggctacggttcgagcggcggcaagaagggtcgg
cggataaaggagattgcacagttctgggacgagcggtggagcaagaagaggatgatttct
gatctgggcttctcaacaaagtttccagaactcgtcctcgcatcctatacgaagaacccg
tcggcgccgcatgacccagacggtctcgttcaagtgtggaacttgcacatgcacgaccga
cccgagtacatattccatgcccagtcggatattctgactgcaaagttctctccgttccat
ccaaacctcatcgttggtggtgcatactcgggccaagtactgctatgggatactcgtgca
aagtcggcaccggtacaaaagacgccgctcacaggttcgggacatacccatccagtctac
tcacttgacattgtcggaacccaaaacgcgaacaacatcatctcctgttcaaccgacggc
gtcgtatgtggttggactgtcgacatgctctcacagccacaagagttcctcgaattgacc
tcaccgccgcctgcaaagacggatgacatggccgtaaccgccattgcctttcctcaatca
gatcccacctacttcctcgctggcacagaagaaggctccatctacccctgccaccgctac
gaccgtgcaggtgcaaaagccggtgtagacggccgcgtcaagtacgccggccacgccgca
cccgtcatgagccttgacttccatcccgcaaagggccaaatcgacctcggcgaccttgtc
ctctcatccagcgtcgactggagcgtcaagctctggaaagtccgtcctccagccgcaacc
ggcgcaaccaaccccaccctccccggcgccacccaacaagtcacacccgtcctcgacatc
gcgcgcgaagatctcgtctacgacgtccgctggtcccccgtcaaaccctccgtcttcgcc
ctcgtcgacggcgcaggcagcctggaagtctgggacatcaacgtcgatatcgaagtaccc
gtccagtctgtcaagcccagtgatggcaaacgcggcgcttttactaatatgccgacgggc
ctgggctacatgaatcgcagtctgaataagctggcttgggagcgcaatgagggtaggcgt
gtggctgttggcggtatggatggcgtggtcacggtgtttgagcgtagcgggatggagcgc
gccgaacgcatcatcgtcatcatcattctctatggtaccgctggtttgtgggaggagtga
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