Pyrenophora tritici-repentis: 6346427
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Entry
6346427 CDS
T10215
Symbol
PtrM4_151240
Name
(RefSeq) nuclear pore protein (Nic96)
KO
K14309
nuclear pore complex protein Nup93
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6346427 (PtrM4_151240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6346427 (PtrM4_151240)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6346427 (PtrM4_151240)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
6346427
NCBI-ProteinID:
XP_001938478
UniProt:
A0A2W1DKL2
B2WEY5
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All DBs
Position
9:1995152..1997895
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AA seq
898 aa
AA seq
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MGSTLRDLNQFSSQGGLAATTQAQNLFDNDNDVDSYITNLHSQSTLALIQEGLEQSKRDF
DTFLEDNVQIEWDKQRQKIYEHFGLGRQSEDLTASQSAFGSTARGAFGRTTNRKGRSMGP
NNASVNGRSTFGASAAGPPVLGLSQSVLGGRESSDKSVMGGQAGLQDRYARDKQEKFMNE
VKRLNEARLREDPFLVLHAFSEVEKVSGTEYSDHFINAYGALISITGEKNDVEALNPSSN
QPKERSFTKDYLDDQPNSVASVRMRKRILDGSRKYLESKFLEQVEDVLRRNPAEALVGGV
PSMVNKIRGFVRAKAAFKELGAEPELFQRIGDNGEEFPWIIIFYLLRGGLLAEAAEYVRE
KRNFFQNTDRNFASAITQYATDPDRRLTPDTQQKVGHTHAQRTRLKTPEDPYRMACYKIV
GRCDMSKRNLDPIKETMDDWVWLQFNLAREGNRAEENAGEVFGLEEIRTTIAEIGQKHFT
NDVQDSGGYGVYFYLATLAGLFEPAINYLYTHNYVSAVHFAVALDYYGLLRVSDWTTAGS
EILTYTTRQQPQLNFGRVVGYYTSDFRAARADAAAEYLVLICMNADLPGEAGKQQAGLCH
EALRELVLETREFATLLGDVKSNGQTTLGLIQERVPLLKLDGETGLLNTITSEAARMADD
NGRINDAILLCHLAGEYDSVVTILNRALAEALSVELGQEPLRLEPLKPRLTPAESQQLQQ
QRSDLTSSSLSMLGTDDPVELAQKVLALYDANSLWWRKVNQMNRDTVGILYNLNNAKKII
EAGDYMTALGQIENLRILPLSAGGNVSDIRATANSFNQYPAEISRNIGNVLLWCIGCCSR
HREHLLSGQFDDPMRKVLADQLLQKAKDLMVFAGLIKYKLPPRVFETLAREGQDVGAL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcaccctccgcgacctaaaccaattctcgtcccagggcggtctggctgcaact
acccaggcacaaaatctcttcgacaacgacaacgacgtggacagctacatcaccaatttg
cactctcaatccaccctggcactcatccaggaaggactggagcagtcaaaacgcgacttc
gacaccttcctggaggataatgtccagatcgaatgggacaagcagcgccagaagatttac
gagcactttggcctgggcagacagagtgaggacttgaccgcatcacaaagcgcattcggc
agcacagctcgcggtgcgtttggacgcactacaaaccgaaagggccgctctatgggcccg
aacaatgcctctgtgaatggcagatcgacttttggagcgtctgctgccggaccgcccgtt
ctcggcctctctcaaagcgtgttgggtggacgagagtcgtcggacaaatctgtcatgggc
ggtcaagctggccttcaagaccgctacgcccgcgacaagcaagagaagtttatgaacgag
gtcaagaggctcaacgaggcaagactgcgcgaggatcccttcctggtgctccatgccttc
tccgaagtggagaaggtgtctggtaccgaatactcagaccacttcatcaacgcttacgga
gcactgatttccatcactggcgagaagaacgatgtggaagccttgaacccaagctcaaac
cagccgaaagagcgaagcttcaccaaggattatttggacgatcaaccaaactccgttgcc
agcgtacgaatgcgcaagcgtatactagacggttctcgcaagtatctcgaaagcaagttt
ctggaacaggtagaagatgtcttgcgaaggaatcctgcagaggcgctcgtaggcggtgta
ccttccatggtgaacaagattcgaggcttcgtacgagccaaggccgctttcaaggagctg
ggtgcagagcctgagcttttccagagaataggcgataacggtgaagagttcccgtggatc
atcatcttctacttgctaagaggaggtctacttgccgaggctgctgagtatgttcgagaa
aagaggaacttcttccagaacaccgacagaaacttcgcatcggcaattacacagtacgcc
actgatccggatcgaaggctcaccccagatacgcagcaaaaagttggccacacacacgcc
cagaggactcgcttgaagaccccagaagacccctatcgaatggcctgctacaagattgtc
ggtcgatgtgatatgagcaagcgtaacctggaccctatcaaggagactatggatgactgg
gtttggctgcaattcaacttggcccgtgagggcaacagagccgaagagaacgctggtgag
gtcttcggcttggaagagattcgaacgaccattgcagaaattggccagaaacatttcacg
aacgacgtacaggactctggcggttacggagtttacttctatcttgctacgcttgcaggc
ttgtttgagccggccatcaactacctgtatacccacaactacgtctctgcggtacacttt
gccgttgcgctcgactactacggcctcctacgggtatcagactggactaccgcgggcagc
gaaatcttgacatatactactaggcaacaaccgcagctaaactttggacgggtggttggc
tactacacaagcgacttccgtgctgctcgggctgatgctgcggctgagtacctggtgttg
atctgcatgaatgcggacttgccgggcgaagcgggtaaacaacaagctgggctctgccat
gaagcccttcgtgagcttgtcctcgagacacgcgaattcgccacacttctgggcgacgtc
aagtcgaatggccagaccaccttgggtctcatccaggagcgtgtaccgttgctcaaactt
gacggcgaaacgggcttgctcaacactattactagtgaagccgcaagaatggccgacgac
aacggccgcatcaatgatgctatcctgctctgtcacttggcgggcgaatatgacagcgtt
gttacaattctgaaccgcgcacttgctgaggctctttcggtagaactgggccaggagccg
ctgcgtttggaaccattgaagccacgcctaacacccgccgagtcgcagcagttgcaacaa
cagcgctctgatttgacttcgtcaagcctgagcatgctaggaacagatgatccagtcgag
ctcgcacagaaggtccttgccctctacgacgcaaacagtctgtggtggaggaaggttaac
cagatgaaccgcgatacagtcggtatattgtacaacctcaacaacgcaaagaagatcatt
gaggccggtgactacatgacagcactaggccaaatcgagaaccttcgtattcttcccctg
tcggccggaggcaatgtcagcgacattcgcgccactgccaatagcttcaaccagtatccc
gcggagatttctcgcaacatcggcaatgtgcttctctggtgcattggctgctgctcacgg
caccgtgagcatctgttgtctgggcaattcgatgatcctatgcgcaaggtgctagcggac
cagttgttgcaaaaggccaaggatttgatggtctttgctgggctgatcaagtacaagttg
ccaccgagagtgttcgagacgctggcgagagaaggtcaggatgttggtgctttgtaa
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