Pyrenophora tritici-repentis: 6346516
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Entry
6346516 CDS
T10215
Symbol
PtrM4_150310
Name
(RefSeq) SNC1, Synaptobrevin-VAMP protein
KO
K08516
synaptobrevin homolog YKT6
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04130
SNARE interactions in vesicular transport
ptrr04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
6346516 (PtrM4_150310)
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
6346516 (PtrM4_150310)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6346516 (PtrM4_150310)
Membrane trafficking [BR:
ptrr04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
6346516 (PtrM4_150310)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
6346516
NCBI-ProteinID:
XP_001938567
UniProt:
B2WF74
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All DBs
Position
9:1760659..1761515
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AA seq
196 aa
AA seq
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MKVLYIGILRNEVKPAVELCAERDLSSYSRFTRGSISEFMSFTAKTVAERTRPGQRQDVE
EQQYTFHVYGRTEGICGLIITDQEYPALVAHQLLSKICDEFLAKYPRSAFATATEMSYPE
LKDYIVKYQDPQQADSIMKIQKELDETKIVLHKTIESVLERGEKIDNLVQKSDGLSAQSK
MFYTQAKKQNSCCVVM
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcctttacatcggaattctcaggaacgaggtcaagcccgccgtcgaactgtgc
gccgaacgagacctctcaagctacagtcgcttcactcggggcagcatatcagagtttatg
tccttcacagccaagacagtcgctgaaaggacacgaccaggccaaagacaagatgttgaa
gaacaacagtacactttccacgtctacggccgcacagaaggcatctgcggccttataatc
accgaccaagaataccccgccctcgtcgcccaccagctcctctccaaaatctgcgacgag
ttcctcgccaaatacccgcgctccgctttcgctaccgctaccgagatgtcgtacccagaa
ctcaaggactacattgtcaaataccaagatccacagcaggcagacagcatcatgaagatc
caaaaggagctcgacgagaccaagattgtgctgcacaagactatcgagagtgtgttggag
cggggcgagaagatcgataacctggtgcaaaagagcgatgggttgagtgcacagagtaag
atgttttatacacaggccaagaagcagaactcgtgctgtgttgtcatgtga
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