KEGG   Pyrenophora tritici-repentis: 6346763
Entry
6346763           CDS       T10215                                 
Symbol
PtrM4_147440
Name
(RefSeq) RPB10, DNA-directed RNA polymerase, subunit N (RpoN-RPB10)
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
ptrr  Pyrenophora tritici-repentis
Pathway
ptrr03020  RNA polymerase
ptrr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    6346763 (PtrM4_147440)
  09124 Replication and repair
   03420 Nucleotide excision repair
    6346763 (PtrM4_147440)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrr03021]
    6346763 (PtrM4_147440)
   03400 DNA repair and recombination proteins [BR:ptrr03400]
    6346763 (PtrM4_147440)
Transcription machinery [BR:ptrr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     6346763 (PtrM4_147440)
  RNA polymerase III system
   RNA polymerase III
     6346763 (PtrM4_147440)
  RNA polymerase I system
   RNA polymerase I
     6346763 (PtrM4_147440)
DNA repair and recombination proteins [BR:ptrr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      6346763 (PtrM4_147440)
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 6346763
NCBI-ProteinID: XP_001938812
UniProt: A0A316ZZJ4 B2WEA7
LinkDB
Position
9:<1000501..>1001001
AA seq 77 aa
MIVPIRCFSCGKVTGDLWEKYMNLLSDGAEEADALDAVGLQRYCCRRMILTHVDLIEKLL
KYNASEREQARAARGGR
NT seq 234 nt   +upstreamnt  +downstreamnt
atgatcgtccctatccgatgcttttcttgtggcaaggtcactggcgacctctgggagaag
tacatgaacctactgagtgatggcgccgaagaagccgatgcccttgacgccgtcggccta
cagcgctactgctgccgccgtatgattctcacccacgttgatctcattgagaagctcctt
aagtacaacgccagcgaaagagaacaagcccgcgctgcccgaggcggtcgatga

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