Pyrenophora tritici-repentis: 6346861
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Entry
6346861 CDS
T10215
Symbol
PtrM4_146520
Name
(RefSeq) RRM-5 multi-domain protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6346861 (PtrM4_146520)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6346861 (PtrM4_146520)
Spliceosome [BR:
ptrr03041
]
Complex B
Other components
Prp19-related factors
6346861 (PtrM4_146520)
Complex C
6346861 (PtrM4_146520)
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
Nup35_RRM_2
RRM_YTH1
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
6346861
NCBI-ProteinID:
XP_001938907
UniProt:
B2WEK2
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All DBs
Position
9:<765011..>766138
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AA seq
375 aa
AA seq
DB search
MPPQIKTDLNRSGWETTDFPSVCEKCLPDNPYVQMLKEDYGAECKICTRPFTIFRWKADR
TARQKRTNICLTCARLKNCCQHCMLDLSFGLPIVVRDAALKMVAPGPQSDINRQFYAQEH
EKEIEEGRGAMEAYEKTDEKARDLLKRLAQSEPYYKKQRRIEADGEESGQKALPAPGGSG
GGSSEGGHVPGPIRTRDTRGTPTRGSMRPGRGGRMGGPSAEPNPQDWLPPSDSNVASLFV
TGVEDDLPEHELRKHFTQYGQLRSLVCSHRAHCAYVNYVNRKDAETAAETLKGKVVIKGC
PMRVTWGKPKQLDSLDQNVRMQYAKEGRQVAGSSRRAAATQAAIQAAPQNSLDSMIVAPP
PGEDDDVKYASLEGN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccaaatcaagaccgacttgaaccgtagcggctgggagacgacggattttccg
tccgtctgcgagaaatgcctaccggacaacccgtatgtgcagatgctcaaggaggactat
ggtgctgaatgtaaaatctgtacgcgaccttttaccatctttcgctggaaagccgaccgc
accgcccgacagaagcgaacaaacatctgcctgacatgcgcccgcctcaagaactgctgc
cagcactgcatgctggatctttcattcggtcttcccatcgttgtccgtgatgcggcgctg
aagatggtggcacctggaccccagagcgacatcaaccgacagttttatgcgcaagagcac
gagaaggagattgaagagggacgcggagctatggaggcgtatgagaagacggatgaaaag
gcgcgcgacctgctcaagcgcttggcacagagtgagccctactacaagaagcagcgacgg
atagaggcagacggcgaagagagcgggcaaaaggcactaccagccccaggtgggagcggt
ggtgggagcagtgaaggtggacatgttccagggcccattaggactcgggacacgaggggc
actccgacacgaggaagcatgcgacctggcagaggaggtcgtatgggtggtccatcggct
gagccgaacccgcaagactggcttccgccttccgattccaacgtcgcatcactcttcgtc
actggtgttgaagacgatctgcccgagcacgaactccgcaaacactttacacaatatggt
cagctcaggtcgctggtctgctcacatcgcgcgcattgcgcatacgtcaattatgtcaac
aggaaagacgcagagactgcggcagaaacactgaagggcaaggttgtcatcaagggctgc
ccaatgcgggtcacttggggcaagccgaagcagttggacagcttggatcagaatgttagg
atgcaatacgcaaaggagggacgacaggtagcgggttcatcccgacgggctgcggctact
caagctgctatccaggctgctccacagaacagcttggacagcatgattgttgcgcctcca
ccaggagaggacgacgatgtgaagtatgccagtttggaaggcaactag
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