Pyrenophora tritici-repentis: 6346864
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Entry
6346864 CDS
T10215
Symbol
PtrM4_146490
Name
(RefSeq) DUF4078 domain containing protein
KO
K25178
coiled-coil domain-containing protein 174
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6346864 (PtrM4_146490)
03041 Spliceosome [BR:
ptrr03041
]
6346864 (PtrM4_146490)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6346864 (PtrM4_146490)
Spliceosome [BR:
ptrr03041
]
Complex C
Other components
EJC/TREX
6346864 (PtrM4_146490)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
6346864
NCBI-ProteinID:
XP_065959859
UniProt:
A0A317B4F8
LinkDB
All DBs
Position
9:755752..756831
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AA seq
315 aa
AA seq
DB search
MSSKDAHLYGARPKGRAKAKDISSSSSLAFSSTLSNLIKNSSAESSKPAAGRARPQKEDI
FKTHNKNVKKRALKDLEDTDFTQKHRGRTAKEKDEDEVAWKRTKRRMEEKARLYDALKRG
DVEDLDDKYGVDFDRKWAEKQEKGEAESAPSSESEASEEEELVEYTDEFGRTRKGTRAEA
AREERRKRTLAADEPDRFTARPSMPSNIIYGDAVQTQAFNPDETIAQQMADLAAKRDKEL
TPPPELHFDGKAEVRQRGMGFFNFSKDEEERKEQMKRFLDELGAELLNGEGGEDNSEDKD
GEGSKKVVEEVEEAA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaaagacgcccacttgtacggcgcacgaccaaaaggacgcgcaaaggcaaag
gatatatctagttccagctcactcgccttctcctcgaccctctccaacctcatcaagaac
tcgtccgccgaatccagcaagcccgctgcaggccgcgcacgcccgcagaaggaagacatc
ttcaagacacacaacaagaatgtcaaaaagcgggccctcaaagacctagaggatacagac
tttacacaaaaacatcggggacggacggccaaagagaaagacgaggatgaagtggcgtgg
aagcgaaccaagcggcgtatggaggaaaaggcacgcctctacgacgccctaaagcgcggc
gatgtcgaagacctggacgacaagtacggcgtcgactttgaccgtaaatgggccgagaag
caagaaaaaggcgaggcagaatccgcaccatcatctgaatcggaagcatcagaagaggag
gagcttgtggagtacacggacgagtttgggcgcacacggaaaggtacccgcgcagaagcc
gctcgcgaggagcgccgaaaacgtaccctagcagccgacgaacccgaccgcttcacagcc
cggcccagcatgcctagtaacatcatttacggggatgccgtgcagacgcaagccttcaac
cctgacgaaaccatcgcccaacaaatggccgacctagccgccaagcgcgacaaggaactt
accccgccacccgaactacactttgacggcaaagccgaggtgaggcagcgtggaatgggc
ttcttcaacttctccaaggacgaggaggagcgtaaggagcagatgaagcggttcttggat
gagctgggggcggagttgctaaacggggagggaggagaagacaacagcgaggataaagat
ggagaggggagcaagaaggtcgtagaggaggtcgaggaagctgcgtaa
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