Pyrenophora tritici-repentis: 6346927
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Entry
6346927 CDS
T10215
Symbol
PtrM4_145680
Name
(RefSeq) SWAP multi-domain protein
KO
K12842
U2-associated protein SR140
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6346927 (PtrM4_145680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6346927 (PtrM4_145680)
Spliceosome [BR:
ptrr03041
]
Complex A
U2 snRNP components
U2 related factors
6346927 (PtrM4_145680)
Complex B
6346927 (PtrM4_145680)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
6346927
NCBI-ProteinID:
XP_001938973
UniProt:
B2WER8
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All DBs
Position
9:<539153..>541240
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AA seq
695 aa
AA seq
DB search
MSFKFSLGAAKTGKAPLNAKAKEEAEAKAREEKNALDKVMADLEEEHGAKKSVLGEPERQ
QETEEVFVPTGSKRHFTGRARTMKSGPGTLEAEPFDGYSRPGPGMGRLAPQVPSKFARAM
PTGPAAQDGSKQAENVYTTVVAKASNLPPAIDPRRVEELFAAFPSLKVTRVERVPPQGPA
ASGRPSATMKVVFDKDVTARDLDDAMNKLNDKMYLGRGYYLHLDRYLGGRSVDTAQRAEP
FGARWQAPDVPKGYAPPPDLGGGGNARNRPREDREQLIVTANQPPDIATLKLVHQTIEGV
ILGGVEFEAALMNDPQVQEEERFAWLYDQKHPVNRYYRWRLHQIVCDSPDAEIFKNHGIW
RGPADPLPHEFVDDLQTFEPEDTPIDSDDEDEKEKPLYKPLPVGDNYPGRVDNGHGIMDP
KSRAMLLWLITHMPPGSIVVDEIAAVATFAMDHTNQGMDEVIHILVSNIIQPFQLTETNM
KFKGDLDGKDDIRRPDLRQVTVNALRLLSDVLLVAPSGPSGSYKYRQAIGTELVARKVFE
HLEQLPTQLEMGRMTERSYRDEVNSILRVWQDERLFDEGPLRHIDEAFNARERQKEEEEQ
AKRLAEKRKRKGKVVRRAVSASADEQSEDRMDVDDAQTPEAATPDAPVMEEPAEQAVPEE
VPKPAPQPLIPGETAVERARRLRPKAEDMFALDDV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaagttctcactaggggctgcgaaaaccggcaaggcgccattgaacgccaaa
gcaaaagaagaggccgaagcgaaggcgcgcgaagagaagaatgccctggataaggtcatg
gccgatctcgaggaggaacacggagctaaaaagagtgtattgggagagccggagcgtcag
caagagactgaagaagttttcgtcccgacagggagcaagaggcatttcacaggcagggcg
cgcactatgaagagcggaccgggtacactcgaagctgagcctttcgatggctactcaaga
ccaggcccaggtatgggaagactcgcgccgcaggttccctcgaaatttgcaagggcaatg
cctacaggtcccgctgcgcaagatggctccaagcaggcggagaatgtatacacgacggtc
gtagcaaaagcctcaaacctaccacccgcaatcgacccccgtcgcgtggaagaactattc
gctgcattcccctcactcaaggtcacaagggttgagagggttccaccacagggccccgcc
gcgagcggtcggccgtccgcaacgatgaaggtcgtattcgacaaggatgtgactgcgcgc
gacctcgacgacgccatgaacaagctcaacgataagatgtatttgggcaggggctattat
ctacatttggacagatatcttggtggtcgttcagtggataccgcacaacgtgcagagccc
tttggcgcacgatggcaggcacccgatgtacccaaaggctatgcgccccctccagatcta
ggcggtggtggaaacgctagaaataggccacgcgaagacagggagcagctcatagtcacc
gccaaccaacccccggatatcgctacactgaagctggtacaccagaccatcgaaggtgtt
atacttggtggggttgagtttgaggctgctttgatgaacgacccgcaagttcaagaggag
gaacgatttgcttggctctacgatcagaagcaccccgtgaaccgatactaccgttggcgt
ctacatcagattgtttgcgatagccccgatgccgagatcttcaagaatcatggcatctgg
cgaggtccagcagatccacttccccatgagtttgttgacgatttacaaacatttgaacca
gaggacactcctatagacagtgatgacgaagacgaaaaggagaagcctctatacaagcct
ctcccagttggtgacaactatcctggtcgcgtcgacaatggacacggcatcatggatcct
aaatcacgcgccatgttactatggttgatcactcacatgccgcctggcagcattgtggtc
gacgaaatcgcagctgttgctacctttgcaatggatcacaccaatcaaggcatggatgag
gtcattcacattctcgtgtcaaatatcatacagcctttccagttgacggagacaaacatg
aagttcaagggggatttggacggaaaggatgacattcgccgtccggatcttcgacaggtg
actgtgaacgctcttcgactcctttcagatgtgcttctagtcgctccatcagggccttcc
ggttcctacaaatacagacaagctatcggcacagagctcgtggcccgcaaagtctttgag
catctcgagcaactccccacgcagctggagatgggccgtatgactgagaggagctataga
gacgaggtcaactcgatccttagggtatggcaagatgagcgtctattcgacgagggtcct
ctccgccatatcgacgaggcatttaatgcgcgcgagaggcaaaaggaggaggaagaacag
gcaaagcggttggcagagaagaggaagcgcaagggcaaagtcgtgcgtagggcagtcagc
gccagcgcagatgagcagagcgaggacaggatggacgtggacgacgcgcagactcctgaa
gcagcaaccccagatgcaccagtcatggaggaacctgcagaacaggctgtgccggaagaa
gtccccaagccggcgccccagcctcttattccaggcgagacggcagtggagagggctcgc
cggttacgcccgaaggcggaggacatgtttgcgcttgacgacgtgtag
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