Pyrenophora tritici-repentis: 6347077
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Entry
6347077 CDS
T10215
Symbol
PtrM4_032520
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04142
Lysosome
ptrr04144
Endocytosis
ptrr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
6347077 (PtrM4_032520)
04142 Lysosome
6347077 (PtrM4_032520)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
6347077 (PtrM4_032520)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6347077 (PtrM4_032520)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrr04147
]
6347077 (PtrM4_032520)
Membrane trafficking [BR:
ptrr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
6347077 (PtrM4_032520)
Exosome [BR:
ptrr04147
]
Exosomal proteins
Proteins found in most exosomes
6347077 (PtrM4_032520)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
6347077
NCBI-ProteinID:
XP_001939123
UniProt:
B2WFT5
LinkDB
All DBs
Position
1:<8422500..>8428058
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQRQVPLHVTQPTLLTNLNILPASISWQNCTLESDKYVCVRQVNNEANAPAETVIIDLK
NTNNVIRRPIRADSAIMHLTEPIIALKAQGRTLQLFNLETKERLQTYSHQEDIQFWRWIS
QTTLALVSTKAVYHWDVLDSKNAVAPRKIFDRQEQLENNQIINYVTNDDESWSCLVGITS
NPAGGIRGNMQLFSKARNVSQPLEGHAATFGTLRLDGASTDTKIFAFAVKSSTGEAKINI
VEVDHNAANPAFPKRLIPIHWPAEGTGDFPLGIHIAHKYGILIVITKFGFIHLHDLETGT
ALFLNRISEETVFTTARDDEGTGVVVINKRGQVLHTTIREDTLIPYIMENPACAEIAYKL
ASKGGLPGADQLYSQRFETLMTQGNFSEAAKVAANSPRGFLRTMNTINRLRQVPNQPGQI
TVLLQYFGQLLDKGGLNKEETLELARPVFAQGRKHLIEKWQKEGKLHCSEELGDLAKPHD
LNLALAIYKEANVSQKVVAALAELGHYDLILQYCNGVGYTPDYNVLLQHVVRISPDKGTE
FASQLAKNEGGPLISIDRVVDIFQSQGMIQQATAFLLDVLSNDLPEEGPMQTKLLEMNLL
NAPQVADAILGNEMFHHYDKMRIAQLCENAGLLTRALEHNDDPAAIKRIIVQTDKLPEEW
LINYFGQLTVELSLESLDAMLTTNIRQNLQAVIRIAQKYSDLLGATRIIDLLEKHRTAEG
LYFFLGSIVNVSEDPDVHFKYIEAATTMGQLNEVERICRESNYLNGEKVKNFLKEANLTE
QLPLIIICDRFNFVHDLVLHLYKKQQFKSIEVYVQRVNPARTPAVIGGLLDVDCDESIIK
GLLASVTPSSIPIDELVAEVESRNRLKMLLPFLEQTLASGNQQQAVFNALAKIYIDSNNN
PEKFLKENDQYDTLVVGKYCEKRDPNLAALCYSKGMNDLELVNITNENAMFKIQARYLLE
RADSEIWDYVLSPNNIHRRSLVDQVTSSAVPSSTDPDKVSVAVKAFITGDMPAELIDLLE
KIILEPSTFSDNPSLQNLLMLTACKSDRGRVMGYIQQLDQYTPEDIAQQCIEVGMYDEAF
EIFKKHENHVEAVNVLIDHIVSIDRAQEFADRVDKPEVWSRVAKAQLDGLRVTDSIESYI
RAGDASNFLEVIEIATHAGKDEDLIKFLRMARKTLREVPIDTALAFCFARTNQLSELEDF
LRATNVADVEASGDKAYEEGYHEAAKIFYTSISNWAKLATTLVHLDDYQAAVECARKASS
VKVWRQVNEACVAKKEFRLAQICGLNLIVHAEELADLVKQYERNGYFDELISVLEAGLGL
ERAHMGMFTELGNALAKYHPERVMEHLRLFWSRINIPKMIRSCEEAHLWPELIFLYVHYD
EWDNAALGMMERAADAWEHQAFKDTITKATNVEIYYRALGFYLEEQPTLLTDLLQALTPR
IDVNRVVRMFVKSDNIPLIKPFLLNVQSQNKREVNNALNDLLIEEEDYKTLRDSVNNYDN
YDPVELAQRLEKHDLVFFRQIAADIYRKNKRWEKSITLSKQDKLFKDAIETSAMSGKPDV
VEDLLRYFVDIGSRECYVGMLYACYDLLRPDVILEMSWRNGLHDFTMPYMINLISQQTAA
IELLKKDNEERKVREASQQKKEEDTPILGSRLMLTQGPIASAPSPGPYGQANGIAPQPTG
SFRAF
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcgacaagttccattgcacgtcacgcagccgacgctgcttacgaacctcaat
atcctcccggcatcgatatcatggcaaaactgtacgctcgagtcggacaagtacgtttgc
gtgcgccaggtcaacaacgaagccaacgcgcccgccgagaccgtcatcatcgacctcaag
aataccaacaatgtaattcggagaccgatccgtgctgacagtgccattatgcacttgacc
gagcccatcatcgctctcaaggcacaaggccgaacactgcaactgttcaatctcgagacc
aaggagcgcctacagacatatagccaccaagaggatatccaattctggaggtggatcagc
cagacgacacttgcacttgttagcaccaaggccgtataccattgggacgtactcgactcc
aagaacgctgttgcgccgcgcaagatctttgaccgtcaggaacagcttgagaacaaccaa
atcatcaactacgttaccaacgatgatgagagctggtcttgcctagtgggcatcacgtcg
aaccctgccggtggtattcggggcaacatgcagctcttctccaaggcgaggaacgtcagc
cagccccttgagggccatgcagccacattcggtacccttcgtctcgacggcgcatcgacc
gataccaagatctttgcctttgctgtcaagtcgtctacgggcgaggccaagatcaacatt
gtcgaagtcgaccacaacgccgcgaacccagctttcccgaagcgactcattccgatccat
tggcctgctgagggtactggtgactttccgctcggcatccacattgctcacaagtacggc
attttaatcgtaatcacaaagttcggcttcattcacctccacgatctcgagactggtacg
gccttgttcctgaacagaatatccgaggagacagtcttcacaacggcgcgcgatgacgaa
ggcactggtgtagtcgtcatcaacaagcgtggacaggtacttcacacaaccatccgcgaa
gacaccttgatcccgtacattatggagaatccggcatgcgcagagatcgcgtacaagctc
gcttcgaagggtggactgcccggtgccgaccaactttactcgcagcgatttgagacgctc
atgacacagggaaacttttcggaagcagcaaaggttgccgccaactctcctcgaggcttt
ctgcgcaccatgaacacgatcaaccgactgcgacaagtccctaaccagcccggccaaata
actgtacttttgcaatattttggtcagctgttggacaagggtggattgaacaaggaagag
accttggagctggcccgacccgtctttgcacagggccgtaagcaccttatcgagaagtgg
cagaaggaaggcaagcttcactgctctgaggagcttggtgatctggctaagccccacgac
ctgaacctggctctagccatttacaaggaagcaaacgtatctcagaaggttgtcgcagca
ctcgcagaacttggccactacgacctcatcctccagtactgcaacggcgtcggctacacc
cccgattacaatgtcctgctccagcatgtcgtgagaatttcacctgataagggtactgag
tttgcttctcaactggcgaagaacgaaggcggaccgctcatcagcattgaccgcgttgtc
gacatcttccaatctcaaggcatgatccagcaggcgacggcttttcttctcgacgttctc
tccaacgatctacccgaggagggccctatgcagaccaagttactcgaaatgaacttgcta
aacgccccccaagttgcggatgctatcctaggcaacgaaatgttccaccactacgataag
atgcgcatcgcccaactctgtgagaacgctgggctgctcacacgtgcactggaacacaac
gacgacccggctgccattaagcgcatcattgttcaaaccgacaagcttccagaagagtgg
ctgatcaattactttggccagcttactgtagagctttcgctcgaatcgttggatgccatg
cttactaccaacatccgacagaatctgcaagctgtaatccgcattgcgcaaaagtattca
gacttgctaggcgctacccgaattatcgatctactagagaagcaccgaactgctgaggga
ctgtacttcttcctgggttccatcgtcaatgtaagcgaggatccagacgtacacttcaag
tacatcgaggctgcgactaccatgggccaactcaacgaggttgagcgcatctgccgtgag
agcaactatctcaatggtgaaaaggtcaagaacttcttgaaagaggccaacctcacagaa
cagctacccctcatcatcatctgtgatcggtttaactttgtgcatgatctagtgctccac
ctttacaagaagcagcagttcaagtccatcgaagtctacgttcaacgtgtcaaccccgcc
aggacccctgctgtcatcggtggtctcctcgacgttgactgtgacgaaagcatcatcaag
ggcctcctggcttcggtaacgccatcctccatccctatcgatgaactggttgcagaggtc
gaatcgcgaaaccgcctcaaaatgcttctgccattcctcgagcagacgttggcgagcggc
aaccagcaacaggccgtattcaacgccttggccaagatttacatcgatagcaacaacaac
ccggagaagttcctcaaagagaatgaccaatacgacactctggttgtaggaaaatactgt
gagaagcgagaccccaatctcgcagctttatgttactccaaaggaatgaacgatcttgag
ctggtcaacatcacaaacgagaatgcgatgttcaagatccaggctcgctatcttctggag
cgtgctgattccgagatctgggattacgtgttgagtccaaacaacatccaccgtcgatct
ctagttgatcaggtcacttcgtcagcagttccttcgtccactgacccggacaaagtttct
gtggctgtcaaggcattcatcactggtgacatgcccgcagaactgatcgacttgctggag
aagattatactggagccatccactttcagcgacaacccatcacttcaaaacttgctaatg
cttactgcatgcaagtctgaccgtggcagggtcatgggttacatccagcagcttgaccaa
tacacccccgaggatattgcccagcaatgcattgaagttggaatgtacgacgaggctttt
gagatcttcaagaagcatgagaatcatgtggaagctgtcaatgtcctgatcgatcacatt
gtgtccattgacagggcccaagaatttgcagacagggtcgacaaaccagaagtatggagc
agagttgcaaaggcacagttggacggcctgcgtgttaccgactctattgagtcttacatt
cgcgctggagatgcctccaacttcctggaagttatcgaaattgcgacccacgctggcaaa
gacgaggacctcatcaagttcttaaggatggcgcgaaagacactccgggaggtccccatc
gatacagctttagctttttgcttcgctcgtacaaaccagctatctgagctcgaggacttt
ttgcgcgctaccaatgttgccgatgttgaggcttcgggtgacaaggcttacgaagagggc
taccacgaggcggccaagattttctacacaagcatttccaactgggctaagcttgctaca
acccttgtccaccttgacgactaccaggctgccgttgaatgtgcgaggaaggcctcgagc
gtcaaggtttggcgtcaagtcaacgaagcctgtgttgcaaagaaggaattccgccttgcc
cagatttgcggtctcaatctcattgttcatgctgaagagcttgccgatctcgttaagcag
tatgagcgcaatggctacttcgatgagctcatcagtgtccttgaagcaggtcttgggttg
gaacgagcgcatatggggatgtttaccgaattgggcaatgcgctggccaagtaccacccg
gaacgtgttatggagcaccttcgattgttttggagcagaatcaacatccccaagatgatt
cgctcttgtgaggaagcccatctttggccagagctaatctttctctacgtacactacgat
gagtgggataacgccgcgttggggatgatggagcgtgctgcagatgcttgggaacatcag
gctttcaaggacaccatcacaaaggccaccaacgtcgagatctactaccgggccttggga
ttctaccttgaggagcagccgactctcttgactgatctcctacaagcactcactcctcgg
atcgacgtcaaccgcgtggttcgcatgttcgtcaaatctgacaacatccctcttataaag
cccttccttctgaacgtccaatcacagaacaagcgcgaggtgaacaacgctctcaacgac
cttttgattgaagaggaggactacaagacactccgcgactcagtcaacaactacgacaac
tacgacccagtcgagcttgcccagcgcctagagaagcacgaccttgtattcttccgtcag
attgctgccgacatctaccgcaagaacaagcgctgggagaagtccatcacgctttccaaa
caggacaagctgttcaaggatgccatcgagacttcggccatgtcaggcaagcccgatgtt
gttgaggatctgctccgctactttgtcgatattggcagccgcgaatgctacgtcggtatg
ctgtatgcctgctacgatctccttcggcctgacgtcattctcgagatgtcatggcgcaat
ggccttcacgatttcacaatgccgtacatgatcaatctcatctcccagcagacagctgcg
attgagttgctgaaaaaggacaatgaggagcgcaaggttcgcgaagcttcgcagcagaag
aaggaggaagacactccgatcttgggctcgcgtctcatgctcacgcagggtccgatcgct
tcggcaccttccccaggtccctacggacaggctaacggtattgccccacagcccactgga
agcttcagggctttctaa
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integrated database retrieval system
