Pyrenophora tritici-repentis: 6347132
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Entry
6347132 CDS
T10215
Symbol
PtrM4_033190
Name
(RefSeq) SpoVK, ATPase AAA+ class
KO
K14571
ribosome biogenesis ATPase
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
6347132 (PtrM4_033190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrr03009
]
6347132 (PtrM4_033190)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
6347132 (PtrM4_033190)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
RuvB_N
AAA_5
AAA_14
TIP49
AAA_18
AAA_28
AAA_33
RNA_helicase
NPHP3_N
AAA_3
Rad17
AAA_2
nSTAND3
AAA_17
Mg_chelatase
TsaE
ABC_tran
ATPase
DUF815
AAA_7
nSTAND_NTPase5
Zeta_toxin
IstB_IS21
DUF5906
Viral_helicase1
Sigma54_activat
TniB
Cytidylate_kin2
Parvo_NS1
Vps4_C
Nucleolin_bd
Motif
Other DBs
NCBI-GeneID:
6347132
NCBI-ProteinID:
XP_001939178
UniProt:
B2WFZ0
LinkDB
All DBs
Position
1:<8593410..>8595686
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AA seq
740 aa
AA seq
DB search
MTKGRSSLQAGLDKEVYQVVRKYLDDKNESPLKLRLSAVYDYIQRSNSSLKRRPKKQLED
SIDRVIDVIREDEESGDEDEMAELEGDFAMDEPKEKNDRSSDWMNRQIVNQWATPANGNG
EKSEKSKKRDGGKSKEERDSKRQRKAAEAARDSKIDTAAPTDMTLDDLGGVGKVKEQLKE
HLVLPLLMPQEYAERKIPIPRGILLHGPPGCGKTVICRAFAAELGVPFIEILGPSVVSGM
SGESEKQVREHFEKAKEVAPCLIFIDEIDVIAPKRDSAQSQMEKRIVAQLLISMDSLAME
GNNGKPVIVLAATNRPDSLDPALRRGGRFDTEINIGVPNEQMRRSILQALTRQPKLSPDV
DFDILAKRTAGFVGADLKDLVSKAGMWSMTQFRAALEKQAAIAETTMEIDNEISAQLDSQ
VDQSIRRLIMRAKNADAPRPEGFENTSLSMEAFQAVLPTITPSSKREGFTTVPNTTWDNV
GALSGIRQELEMAICEPIKDPAKFAKFGISAPTGVLLWGPPGCGKTLLAKAVAAESKANF
ISVKGPELLNKYVGESERALRQVFMRARSSVPCVIFFDELDALVPKRSAELHEASARVVN
TLLTELDGLSEREGIYLIAATNRPEMIDEAMLRPGRLETLLYVELPKPEERVDILKALIR
QRGGLISPELAEIARLDACKDFSGADLESLLRKAGQHALRRRGDSVEYIDFVEAAKTVRP
SVGDVKKYERLREKFETKLF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaggccgctcctctctccaagccggtctcgacaaagaagtgtaccaagttgtg
cgcaaatatctcgacgacaagaacgaatcgccattgaagctacgtctttctgccgtatat
gactatatccagcgctccaattcgagtctgaaaagaagacccaagaagcagttggaggac
tccattgatcgcgtaatcgacgtcatacgggaagacgaagaatccggcgacgaagacgag
atggccgaactggagggcgacttcgccatggacgaaccaaaagagaaaaatgatcgatcg
agtgattggatgaatcgccagattgtcaatcagtgggcaactcctgccaatggcaatggc
gagaagagtgaaaagagcaagaagcgggatgggggcaagtcgaaagaggaacgcgatagc
aagaggcaaaggaaggcagcagaggcggcgcgtgacagcaagatcgatactgcagcacct
acagacatgaccttggatgatcttggtggcgtcgggaaggtcaaggaacagttaaaagag
catttggtattacctctgctgatgccacaggagtatgccgaacgtaagatccctataccc
cgtggcatactccttcatggaccacctggatgcggcaaaaccgtcatctgcagagcgttt
gctgccgaactaggtgtgccctttattgagattctaggtccttccgtcgtttcaggcatg
tctggagagtccgaaaaacaggttcgtgagcatttcgaaaaggccaaagaagtcgctcca
tgcctcatcttcatcgacgagattgatgtcattgcgcccaagcgggatagtgcacagagt
cagatggagaagaggattgttgcacaactactcatctccatggacagcctcgcaatggaa
ggcaacaacggcaagcctgtcatcgtactcgcagccacaaaccgtccggatagtctagac
ccggctcttcgacgtgggggtcgattcgataccgagatcaacattggcgtaccaaacgag
cagatgcggcggtccatacttcaagcgctcacgcgtcaaccaaagttatctccagatgtg
gactttgacatattggcaaagagaacagctggattcgttggcgcggacttgaaggatctc
gtcagcaaagcaggcatgtggtccatgactcaattccgggcagcactcgaaaagcaggca
gctattgcagagactacgatggagatcgacaatgaaatttccgcgcaactagactcgcaa
gtcgaccagtcgattcgtcgtttaattatgcgagcaaagaatgcagacgctccgcgcccc
gagggatttgaaaacacatccctttctatggaagcctttcaggctgtcctaccaactata
actccttcttcaaagcgagaaggattcacaacggtaccgaataccacatgggacaacgtt
ggagcactttctggcattcggcaagagctggagatggctatatgcgagccaatcaaagac
ccagctaagtttgccaaatttggcatctcggcacctactggggtgctactctggggtcct
ccaggttgcggtaagacgctcttggcaaaggcagtggctgcagagtcaaaggcaaacttt
atcagcgtcaaagggccagagctgttgaacaagtatgttggtgaatccgaacgcgctctt
cgacaggtctttatgcgagctcggtcctcagtcccctgcgtcatcttcttcgacgagctt
gatgctcttgtccccaaacgctccgccgagctccacgaagcctctgcgcgcgtcgtaaac
actctccttaccgaactcgatggcctttccgagcgcgaaggcatctatctcatcgccgca
accaaccggcctgagatgattgatgaagccatgcttcggcccggccgcctggaaaccctc
ctctatgttgagctgcccaagccagaagagcgtgtggatattctcaaggctcttattcgt
caacgtggggggcttattagccccgagctggccgaaatagctaggctagatgcttgtaag
gacttctccggtgctgacctggagagtttgttgcgcaaggcggggcaacatgccttgaga
agacgcggagattcagtagagtatatcgacttcgtggaggcagccaagaccgtacggcct
agtgttggtgatgtgaagaagtacgagcgtctacgagagaagttcgaaacgaaactgttt
tag
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