Pyrenophora tritici-repentis: 6347205
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Entry
6347205 CDS
T10215
Symbol
PtrM4_033920
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04136
Autophagy - other
ptrr04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
6347205 (PtrM4_033920)
04136 Autophagy - other
6347205 (PtrM4_033920)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6347205 (PtrM4_033920)
03029 Mitochondrial biogenesis [BR:
ptrr03029
]
6347205 (PtrM4_033920)
Membrane trafficking [BR:
ptrr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
6347205 (PtrM4_033920)
Mitochondrial biogenesis [BR:
ptrr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
6347205 (PtrM4_033920)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_IFT122_1st
BCAS3_WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR35_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_IFT80_2nd
Beta-prop_WDR90_POC16_2nd
TRM82_WD
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Ge1_WD40
CPSF_A
Beta-prop_NWD2_C
Beta-prop_Aladin
CFAP251_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
6347205
NCBI-ProteinID:
XP_001939251
LinkDB
All DBs
Position
1:complement(<8772767..>8774255)
Genome browser
AA seq
428 aa
AA seq
DB search
MNFVTFNQDHSHLGVGTTNGYRIYTTDPFNKQSESREGDVSSLEMLFSTSLVALTLSPRV
LRIQNTKRHSTICEMTFRTAILAMRMNRKRLVVVLESELYIYDISNMQMLKTEKTSPNPN
AICALSASSDNNYLVYPLPTKAAPATFQPPSHAPPKADHIAPTSGEVLIYDATKMEAVNV
IEAHNSPLSCIALNNDGTLLATASEKGTIIRVFSIPDAQKLYQFRRGSIPARIYSMSFNS
TSTLLSVSSATETVHIFRLGAPNSRSNSVSSGPTKPTAASHQRTSSRASEETADEFDASI
ADVSFPERKAINPTFGSLIRRTSQTVGKSFAATVGGYLPSAVAEIWEPSRDFAWVKIPRS
PTTSSSGPPRNVVALNNNGPQIMVVTSEGNYYVFNVDLEKGGEGTLYKQYSLLEPNELAA
STSQDVPE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgtaacattcaaccaggatcacagccatttgggcgtcggtacaacaaatggc
tatcgcatatataccaccgacccgttcaacaagcagtccgagtcgcgtgagggagatgtt
tccagcctcgagatgctcttttccacatcgctcgttgccctaacactgtcgcctcgcgtg
ctgcgaatacaaaacaccaagaggcattcgactatatgcgagatgacgttccgcacagcc
attctagcaatgcggatgaacagaaagcgcctcgtagttgtgcttgaatcagaactctac
atttacgatataagcaacatgcagatgctgaagactgagaagacatccccgaaccccaac
gccatatgcgccctgtcagcatcatcggacaacaactacctcgtatacccgctccccacc
aaagccgcgcctgctaccttccagccgccttcacatgctccgcccaaggccgatcatatt
gctccaaccagcggagaggttcttatatatgatgcaaccaagatggaggcagtcaatgtc
atcgaggcgcacaactcgccgctttcgtgcattgcactaaacaatgacggtactttgctt
gctacggcatctgagaagggcaccataatccgagtcttttcgataccggatgcgcagaag
ctgtaccagttcagacggggttcaataccagctaggatttacagcatgtcgtttaattcg
acgtccaccctgctcagcgtatcctcggcaaccgagactgttcacatcttccgcctgggt
gcgcccaacagtagaagtaacagcgtatcctctgggcctacgaaaccgacggccgcttct
catcagcgcaccagtagccgggcaagcgaggagactgccgacgagtttgatgcgagcata
gcagatgtatcgtttccagagcgcaaagcgataaaccccacgtttggaagcttgatccga
cgcacatcacaaacggttggaaagtcgtttgccgcgactgtcggcggatacctacccagc
gcagtagcggagatctgggagccctcgcgcgattttgcttgggtcaaaataccacgttcg
ccaacgacgtcctcatcgggtcccccaaggaacgtggttgcactgaataacaatggcccc
caaatcatggtagtcacaagcgaaggcaactactacgttttcaacgtcgatctcgagaaa
ggaggtgagggtactctatacaagcagtattcactccttgaaccaaacgagcttgccgca
agcacgtcacaagatgtcccagagtag
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