Pyrenophora tritici-repentis: 6347350
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Entry
6347350 CDS
T10215
Symbol
PtrM4_035440
Name
(RefSeq) Nucleoporin-FG multi-domain protein
KO
K14307
nucleoporin p58/p45
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6347350 (PtrM4_035440)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6347350 (PtrM4_035440)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6347350 (PtrM4_035440)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup49_C
Nucleoporin_FG
TetR_C_43
Sec3_CC
NOCA1_mid
PUMA_CC
MIP-T3_C
Tmemb_cc2
Motif
Other DBs
NCBI-GeneID:
6347350
NCBI-ProteinID:
XP_001939394
LinkDB
All DBs
Position
1:complement(<9149877..>9151359)
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AA seq
454 aa
AA seq
DB search
MAGFGRSNSLSINTGGGSGGLFGNNNATQNQQGNQPQSSGGLFGSTQQTQQPQSGSLFGG
QNQTSQPSGGLSGNKPATTAPATGGLFGSSTAQSSQPQSGGLFGGALGGNTQNQTQNTTQ
SGGLFGGTQAKPSLFGSSTQQTTTATPSLFGNTTSNQQNNQQNQTSVPSLFGSTQQQSQP
QQQQNSLFGGMNTQNRPGALGGSTLGGNQTNASAQPVQITLDSIRGTTRFNDLHPELQTL
IQQFDDGIQRKINFCSQIRETMPKTEADIATIAPDVAYIETKLSTVEVGLDNDSANIAYL
KDLVKKDAEDATLSFRAIENQRLPAQFHYRNNTNLTASSAKTPATSALDDDDPTKPVDLM
GYFNRRTDELGRTLDVYQRQIREIEAHLRTMEAGTLEKAQQLTGSRSAPRDQRRELVEAL
KAIEGAILDSAKKVGQVRDDVTKQTLGSVGAALL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctttggaagatcaaactcgctgagcataaacaccggtggtggtagtggtgga
ctatttggcaacaataatgcgactcaaaatcagcaagggaaccagccccagagcagtggt
ggcctcttcggatcgacccaacagacccaacagccacagtcgggatcactattcggtggt
cagaaccagacgtcgcaaccttcaggcggtctatctggcaataagcccgcgactacagcg
cccgcaaccggagggctctttggatcatcgacggcgcaatcatcgcaaccccaaagcgga
ggtctgtttggcggcgcattaggagggaacacgcagaaccagactcagaataccactcag
tcgggaggtctttttggcggtacccaggctaagccctcgttattcggctcgtcaacacaa
cagacgacaacagcgaccccatctttattcggcaacacgacttccaatcagcaaaataat
cagcaaaaccaaacctcggtgccttcgctattcggttcgacgcaacaacaatctcaacca
cagcagcagcaaaacagtctgtttggtggcatgaacacacagaaccggccgggggcactg
ggtggctctacattgggaggaaaccagacgaatgcaagtgcacagccagttcagatcacc
ttggactcgatacggggaacaacgcgcttcaacgatctccatcccgagctgcaaactttg
atccagcaatttgacgatggcatacagcgaaagatcaacttctgcagccagatccgcgag
acaatgcccaagaccgaagctgacattgctactattgccccggatgtggcatacatcgag
accaaactttcgacagtcgaagtaggcctagataacgattccgcgaatattgcctacctc
aaggatctcgtcaagaaggatgcggaagacgcgacactcagcttccgtgctatcgaaaac
cagcgactaccagctcaattccattaccgtaataacacgaacctcacagcctcaagcgca
aagacaccggccaccagcgctctcgacgacgatgacccgaccaaaccagtcgacctcatg
ggctatttcaaccgccgcacagacgagcttggccgcacactagatgtgtaccagcgccaa
attcgcgaaatcgaggcacatcttcggacgatggaggctggcactctggagaaggctcag
cagttgactggcagccgaagtgcgccgcgtgatcagcgacgcgagttggtcgaggctctc
aaagcaattgagggagccattctggactcggccaagaaggtgggacaggttagagatgat
gtgacaaagcagacattgggaagcgttggagctgctcttctctga
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