Pyrenophora tritici-repentis: 6347398
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Entry
6347398 CDS
T10215
Symbol
PtrM4_035990
Name
(RefSeq) HepA, Superfamily II DNA-RNA helicase, SNF2 family
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
6347398 (PtrM4_035990)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
6347398 (PtrM4_035990)
RSF complex
6347398 (PtrM4_035990)
WICH complex
6347398 (PtrM4_035990)
B-WICH complex
6347398 (PtrM4_035990)
NORC complex
6347398 (PtrM4_035990)
BRF complex
6347398 (PtrM4_035990)
NuRF complex (fruit fly)
6347398 (PtrM4_035990)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
6347398
NCBI-ProteinID:
XP_001939442
UniProt:
B2WGQ4
LinkDB
All DBs
Position
1:complement(9308435..9312250)
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AA seq
1271 aa
AA seq
DB search
MACQPTITLASPQPITPPPKRRGAEYQDLLAQFRSQRSAQSATKKRRISAQQEASQGETI
ATDDKSKPSLREQPTPNYAISNTSVNEDTPDRKSTTVPRRTTRASLGRAKPESPSSEDEL
APSARPNRKTSARISAYTEELKMEQKGLRRSTRDRKSTILESDTMPSPSPKRRRAPPKLD
TARARLRDEIAKNSKAKANNFLVANKDLFLPLLPKNNTVAKLVAEGKAQPIVEYEELTEQ
PKGVMATMKPYQLSGLSFLVHLYNNGFSGILGDEMGLGKTLQTLSLFQYLEELDQKKGVT
SEESRPYLVICPLSVLNSWVTEAHRWVPQLKVVRFHGASSERDRLKRVAVGMEDMKGNET
LRARDRKASRKAGQKVSKLSGGQGSDAPKIIVTTYETFQAEQSWFKHSFAWRYVVLDEGH
KIKSSVTQISTALKSISAEYRLILTGTPLQNNLAEMWSLLTWLYPQVFDDKTATLFRESF
DLSKGKANKQTMTDARRLLELIMLRRMKDSPSVNLGLPPKEEVLLYVPLTPLQKFWYTRL
LTRMDDGILDELFADGKSKEKGALEQDAKENELLQQMEKVDKAVGSGGAEGEWGETALIV
KEALSKEQTDSSINKGAWKKLMNLVMQLRKCCSHPYQLPGVAPDPYYLGDHIIRASGKFI
LLEKLLKHTVFAQGKKVLIFSSFTRTLDHCEDLLSLISNHGERFKSLRLDGSTSRARRNL
DIRLFNQKGSDYKVMLLSTRAGGLGINLTSAEDVIFLDEDWNPQITLQAEARAHRIGQTK
KVTIYKLCTQGTVEEQMMGRIRKKLYLSAKITESMQSIHGKQAPETKRGRPSLSEDLPQM
DTTQLKTLVRRGAQALSHPEIDIKDMVSWDLETMMAKCRDKPADMTDSATSSEVDEDKWL
STMERVECAVFEGKRHQRQLDTSRKANTSAANILPDTITREDRRKGKNTTVMIDGYAISK
ESMNCGDWEAVPTYAGKDPRLADPVREKRREFGHESHCLECFEDAGSGHMVECKSCPRAY
HIDCLDSSYKSKVKGFSGFFCSQHKCSECDKSTNDAGGLIYRCRWCPLGFCEDCLDWDQT
ELIGENLPEFEIMGEEAMPGGFYIKCPTCVETIAENEEHKKWLQNMEKQYKDQHHIWQQN
REDAQRQLNKRDVATEVSAENDANAQTNNNLLHLPQLVEPPVKQQNHIVLDNDDDATSSP
ALTDTSLSTPALGGSRVGTPKYTEPVPTTTRTTRKSNKRSEPFGETREEKRARLDAQAWT
VDDDPLMRGMY
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcatgccagccgaccattacgctggcttcgccccagcctataactccacctcctaaa
aggcgtggtgcggaataccaagatcttttggcccagtttagatcccagagatctgcacaa
tcggccacgaagaagaggcgcatctctgcacagcaggaggcgagccagggggaaacaatt
gctaccgacgacaaaagcaaacctagcctgcgtgagcaaccaacaccaaactacgccata
tccaatacatccgtaaacgaagacacccccgaccgcaagtcaaccaccgttcccaggagg
accacccgcgcatccttaggacgagcgaagccagaatcgcctagcagcgaagacgagctt
gcgccatcagcccgtcccaaccgcaagacaagtgctaggatctcagcctacaccgaggaa
ttaaagatggagcagaagggactacgtcgtagtacacgcgacagaaagagcacgattcta
gagtcggataccatgccctcgccgtcacccaaacgtcgtcgcgcaccccctaagctcgat
accgctcgcgcccgtctacgcgatgaaattgcaaagaacagcaaggcgaaagccaacaac
ttccttgtagccaacaaagacctcttcctgccacttcttcccaaaaacaacacggtagcg
aagctggtcgctgagggcaaggcgcaacctattgtggagtatgaagagctcacagagcaa
cccaagggtgtcatggctactatgaagccctatcagctgtccggcctttcgttcctggtc
catctgtacaacaatggcttctctggtatactaggtgacgagatgggtctggggaagacg
ctgcaaaccctgtcgctcttccagtatctcgaagagctcgaccagaagaagggagtgact
tcagaagagtctcgaccctacctcgtcatctgtcccctcagtgtgctcaactcttgggtc
actgaggctcacaggtgggtgcctcagctcaaagttgtgcgctttcatggtgcttcaagc
gagcgagaccggttgaagagggtcgctgtcggtatggaagacatgaagggaaacgagact
ttacgtgctcgggaccggaaggcttcgcgcaaagccgggcagaaagtctccaagctatct
ggaggccaaggatccgatgcccccaaaatcatcgtgacgacttatgagaccttccaggcc
gagcagtcttggttcaaacattcatttgcgtggcgctatgtagtccttgatgagggacac
aagatcaagagcagcgtgacccagatctctactgcgttgaagagtattagcgccgagtat
cgcctcatcttgaccggtaccccattgcagaacaacttggctgaaatgtggtccttgttg
acttggctttaccctcaggtctttgacgacaagactgcgacgctgttccgggagtcgttc
gatctcagcaaaggcaaagcaaataagcagaccatgacagacgcgcgtcgcttgcttgag
ctgatcatgctacgacgcatgaaagactctccatctgtcaaccttggcctcccacccaaa
gaagaagtgttgctttacgtgccgctcacgccattgcagaagttttggtacacacgcctt
ctcactcgcatggacgacggaatactcgacgagctcttcgccgacggcaagtcaaaggaa
aagggcgctcttgaacaggatgctaaagagaatgagctactgcaacagatggagaaggtg
gacaaggctgtcggctctggcggggctgaaggcgaatggggagagacggccctgatcgtg
aaagaggcactatcaaaggagcagaccgactccagtatcaacaagggagcatggaaaaag
ctcatgaacctcgtcatgcaattgcgaaagtgctgttcacatccataccagctgccgggc
gtcgcgcctgatccgtattaccttggcgaccacatcatccgtgccagtggcaagttcatc
ttactagagaagcttctgaagcatacagtttttgcccaaggaaagaaagtcctcatcttc
tctagcttcactcgtacgctcgaccattgcgaagatctcttatccctcatcagcaaccac
ggtgagcgattcaagtctcttcgtctggatggaagtacttcccgtgctcgtcgtaatctg
gacattcgcctcttcaaccagaagggctccgactacaaggttatgcttctgtctactcgt
gcaggcggcttgggtatcaacttgaccagtgccgaagacgtcatctttctcgacgaagac
tggaacccacagatcactctacaagcagaagctcgcgcccatcgtattggacagacgaag
aaggtgaccatctacaagctctgcactcaaggtactgttgaagaacaaatgatgggtcgt
atccgcaagaagctgtatttgtccgcaaagattaccgagtccatgcagagcatacacggc
aaacaagcgccggagacgaagagaggacgcccttcccttagtgaagatttgccgcagatg
gacacgacgcagttgaagacacttgtacgacgaggcgcacaggccttatcgcatcccgaa
attgacatcaaggacatggtatcttgggaccttgagacgatgatggccaagtgtcgcgac
aagcctgccgacatgaccgattctgcgacaagttccgaggtggacgaagacaagtggctt
tcaaccatggagcgcgtcgaatgcgctgtcttcgagggcaagcgccatcagcgccagctc
gacaccagtcgtaaggctaacacgtcggctgcgaacatactccctgacaccatcacgcgc
gaagatcgccgcaagggaaagaacactacagttatgatcgatggttatgctattagcaaa
gagtcgatgaactgtggcgactgggaagcagtgccgacatatgctggcaaagaccctcgc
cttgctgacccagtccgcgaaaagcgacgtgagtttggccacgagagtcactgtcttgag
tgttttgaagacgccggttcgggtcacatggttgagtgtaagagttgtccacgtgcctac
cacattgactgtctggattcgtcctacaagtccaaggttaagggttttagtggcttcttt
tgttcacagcataagtgctcagagtgtgacaagtcgaccaacgatgccggaggcctcatc
tatcgctgccgttggtgcccactaggcttctgtgaggattgtcttgactgggatcagacc
gagctcatcggtgaaaacctacccgagtttgagatcatgggcgaagaagccatgcctggc
gggttctacatcaagtgtccaacctgcgttgaaacaatcgctgaaaacgaggaacacaag
aagtggctccagaacatggagaagcagtacaaggaccagcaccacatttggcagcagaac
cgcgaggatgcacagcgtcagctcaacaagcgtgatgtcgccaccgaagtatccgcggag
aacgatgccaacgcccagaccaacaataacctcctgcatcttccccagcttgtcgagccc
ccggtgaagcagcagaaccacattgttcttgataacgatgacgatgctacctcctcgcct
gctctcaccgatacctcgctttccacgcccgcactgggtggttcacgcgtcggcacacca
aagtacacagagcccgtacccactaccaccaggaccaccagaaagagcaacaagcgaagc
gagccatttggcgagacacgtgaggagaagcgggctaggctcgacgctcaggcttggacc
gtagacgatgatccgctcatgaggggtatgtactag
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