Pyrenophora tritici-repentis: 6347659
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Entry
6347659 CDS
T10215
Symbol
PtrM4_125830
Name
(RefSeq) POL4, DNA polymerase IV (family X)
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
6347659 (PtrM4_125830)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6347659 (PtrM4_125830)
Enzymes [BR:
ptrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
6347659 (PtrM4_125830)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
6347659 (PtrM4_125830)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
6347659
NCBI-ProteinID:
XP_001939701
UniProt:
A0A2W1F8G6
B2WHB0
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All DBs
Position
7:complement(<463688..>465817)
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AA seq
709 aa
AA seq
DB search
MDNQDRSSQTFHARSQSPTSTVSGSGLDLSRLPPIAIFTTHMKDDEENMLRETLRQYDAP
LITDVSRAKIFIGKVGTKQRTRFEFRSRNLLVEEVVAPKRQASPIEAKSNLKKRKFGVTS
ITPIRANEVDSTTEDEVVDESETEDEAPNEGQITPPLSPPTTSNDAPCVTVFENPSNDDI
VWVVKIDWLEACVSAGHVVPLGDNLVYKGKVLERPKPKNTKSIKDIILATSKVKPATQTV
LATRPHTAQDILDRAKLDAPTSAKKTTYQAPRFCNNASHRFEGKAFVPSQTVRHSYASQA
VYLLQQTTSEYEGEDSDIPAPPEWVKNCVKYACQRFTPANGPNEDFLEQLKKIRTARTLI
DDDIGVRAYSTIIASIAAYPYKLSHPRELARLPGCDEKTVALFVEWKNTGKIQAVEDYEN
DEAMKVLRCFYNIWGVGAKTTRHFYYNNHWKELDDIVEYGWNDLKRVQQIGVKYYEEFLL
PIPRDEVERIAAVVREHAVRLRDDRVTVTLVGGYRRGKTESGDVDMIVSHPDLESTAGLV
QEIVESLEETEWITHTLTMSLTSTNRGQQVLPFRSTRVAGAGFDTLDKALVVWQDPTWPT
REEDLAENPKTKNPAIHRRVDIIIAPWRTVGCAVMGWSGGTTFQRDLRRYAKAVKEWKFD
SSGVRSRSTGEVIMLEGPNGVDGMPEDAEKKVFEGLGLEYIPPEYRVTH
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggacaaccaagaccgttcttctcagacattccacgcaagatcccagtctcctacatca
accgtatccggatcaggcctggatctcagtaggctcccgccaatagccattttcaccacg
catatgaaggacgatgaagaaaacatgctcagggaaacgttacgccaatacgatgcaccg
cttataaccgatgtttcaagggcaaagatcttcattgggaaggtagggactaagcaaagg
accaggttcgagtttaggtcccgaaacttgctcgtagaggaggtggttgcacctaagcgg
caggcaagtcctatcgaggcaaaaagtaatcttaagaagcgcaaatttggtgtaacatca
atcacgccgatacgagccaacgaagtagattccactactgaggacgaggtcgtggatgaa
tcggagactgaagacgaagcaccaaatgaaggacagattactccgccgctgtcacctcca
acgactagtaacgatgcgccttgtgtaacagtgtttgaaaatccgtcgaacgacgatatc
gtctgggttgtcaagatcgactggctagaagcttgtgtatctgcaggccatgtggttcca
ctgggggacaacttggtttacaagggcaaagtcctagaacgcccgaaaccaaagaacaca
aagtctatcaaggatatcatcttggccacttcgaaagtgaagcctgcaactcagaccgtg
ttggctacacgacctcatactgcgcaagacattctggatcgagcaaagttggatgcacct
acatctgcaaaaaagactacgtatcaggccccccggttttgtaataacgcgtctcatcgt
ttcgaaggcaaggcctttgtaccttcccaaacggttcgtcactcatatgcttcgcaagcg
gtgtatctactccagcaaacgacgagtgagtatgaaggcgaagatagtgacatcccagca
cctccagagtgggtgaagaattgtgtgaagtacgcctgccagcgtttcacgcctgcaaac
gggcctaatgaggactttcttgagcagctcaagaaaatcaggactgctcggactctgatc
gacgacgatataggtgtccgtgcttactccacaatcatcgcgtctattgctgcctaccca
tataaacttagtcatccgcgtgagcttgcgcggttgcccgggtgtgatgagaaaacagta
gctctcttcgttgagtggaagaacactggtaaaatccaggcagtcgaagactatgagaac
gacgaggcaatgaaagtcctccgctgcttctataatatatggggcgtcggtgcaaagact
actcgtcacttttattacaataatcactggaaagagctagacgacattgttgaatacggt
tggaatgacttgaaacgagtccaacagattggcgtcaaatactacgaagagtttttgtta
ccgatcccgcgcgacgaggtcgaacgtattgccgctgttgttcgagagcatgcagtgcgg
ctccgtgacgatcgcgtcaccgtcacgcttgtcggtggctatagacgtggcaagactgaa
tctggggacgttgatatgatcgtgtcgcatcctgatctcgaaagtacagcaggcttggta
caagaaatcgtcgagtcgctggaagagactgagtggataacacatacccttacgatgagc
ttgacgagtacgaatcgcggtcaacaagtactgccatttcgctctacaagggttgctggc
gcagggttcgacacacttgataaggcacttgtggtatggcaagaccctacgtggccgaca
cgcgaagaggatttggcggagaatcctaagacgaagaatccagctattcaccgccgagtg
gatatcatcattgcaccttggcgaaccgtaggatgtgcagttatgggctggagtggcggc
accacgttccagcgagaccttcgacgctacgcaaaggctgtcaaagagtggaagtttgac
agcagcggcgttcgaagtagaagtactggcgaggtcatcatgttggagggaccaaatggg
gtagatggcatgcctgaagatgcggagaagaaggtatttgaagggctgggcctggagtat
atccctcctgagtatagggtcacccattga
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