Pyrenophora tritici-repentis: 6347685 Help Entry 6347685           CDS       T10215                                  Symbol PtrM4_126130 Name (RefSeq) WD40 repeat protein   KO K03361   F-box and WD-40 domain protein CDC4 Organism ptrr  Pyrenophora tritici-repentis Pathway ptrr04111   Cell cycle - yeast ptrr04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ptrr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     6347685 (PtrM4_126130)  09140 Cellular Processes   09143 Cell growth and death    04111 Cell cycle - yeast     6347685 (PtrM4_126130)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ptrr04121]     6347685 (PtrM4_126130) Ubiquitin system [BR:ptrr04121]  Ubiquitin ligases (E3)   Multi subunit type E3    SCF complex     Target recognizing subunit (F-box)      6347685 (PtrM4_126130) SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_TEP1_C DSE1_N Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st F-box-like Beta-prop_WDR41 NBCH_WD40 ASA1 WDR90_beta-prop_4th Beta-prop_DCAF4 CFAP251_N Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 ANAPC4_WD40 TRM82_WD Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_ACSF4 F-box Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_LRRK2 Beta-prop_HPS5 Beta-prop_pof12 Beta-prop_IFT140_1st WD40_like PEP5_VPS11_N PQQ_2 F-box_COS111 Motif Other DBs NCBI-GeneID:  6347685 NCBI-ProteinID:  XP_001939727 LinkDB All DBs Position 7:complement(<531619..>533887) Genome browser AA seq 687 aa AA seqDB search MDPDYFTSVRDDRDPTAPQIEDSDTDMAASASATASSSRPFMQNSPALHGRKARMSRSGA PRPIITPTSPSSSSIPHTLLASAPASPPTPAPSPTPTQRVPDWSTAAEHEDGDIKSIRAQ FGDMNRAERMRLLGELLNLCDSQELSFVAEFVSPRLKKDPFMVLPTELCLRILECVDDPT TLARASQVSKKWRELVNDDSAWRLLCQKFSFRALPKEDRIEDDAAGDDMEDADSKSWWQN DERAPRTDDVLAREHLEVGPSNIGTEGLRTQSLDRAAKRKSSYRRPQATTYRSHFKQRYM VETAWRNGGVCDARQITPDQGVVTSLHLTKKYIVVALDNAKIHVFDTVGDHQKTLQGHVM GVWAMVPWGDLLVSGGCDRDVRVWNLATGFPQFTLRGHTSTVRCLKMSDANTAISGSRDT TLRIWDLKKGLCKHVLIGHQASVRCLEIHGDIVVSGSYDTTAKIWSISEGKCLRTLTGHF SQIYAIAFDGKKIATGSLDTSVRIWDPNDGKCLAVLQGHTSLVGQLQMRDDILVTGGSDG SVRVWSLATYQAIHRLAAHDNSVTSLQFDNTRIVSGGSDGRVKVWDLKTGVPVRELSSPA EAVWRVVFEEEKAVIMASRGGRTIMEVWDFSPPAEEDFDSRSSTPASMPEHLEVEYNRPR SAILPTTSPLVQDHSVGDVTMADANDS NT seq 2064 nt NT seq  +upstreamnt  +downstreamnt atggatcccgactacttcacaagcgtgcgagacgaccgcgacccaaccgcgccccaaatt gaagattccgacactgacatggccgcatctgcgagcgctaccgcttcttcatcacgaccc tttatgcagaactcacccgcactccacgggcgcaaggcacgcatgtctcgctcaggagcc ccacggcccataatcacgcctacgagcccgtcatcgtcatcgataccgcacaccctccta gcctccgccccagcctcgccgcccacacccgctccgagtcccacgccaacgcagcgagtg cccgactggagcaccgcggccgagcacgaggatggagatatcaagagtatacgtgcccag ttcggcgatatgaaccgcgccgagcggatgcgcctcctgggcgagttgctgaatctgtgc gacagccaggagctaagcttcgtggccgagtttgtcagtccccggttaaagaaggaccca ttcatggttctaccaaccgaactgtgcctcaggattcttgaatgcgtcgacgaccccacg actctcgcccgagcctcgcaggtgtccaagaagtggcgtgaactcgtcaacgacgacagt gcctggcggttgctgtgccaaaagttctccttcagagctttgccaaaagaagacaggatc gaagacgatgccgccggtgacgacatggaagacgccgattccaagtcgtggtggcagaat gacgagcgtgcccccagaacagatgatgtgctggcaagagaacacctcgaagtcggcccg tcaaatataggcactgagggcctgcgcactcagagtctcgaccgagctgccaagagaaag tcatcgtaccggagaccacaagcgaccacataccgctcgcatttcaagcagcgatacatg gtcgagactgcgtggcgcaacgggggagtatgtgacgcgcgacaaatcaccccagaccag ggtgtagtaaccagtctacacctgactaagaagtacattgtggttgcgcttgacaatgca aagattcacgtcttcgacacagtcggcgaccatcagaaaaccctccaggggcacgtcatg ggggtgtgggccatggtcccttggggcgatctattggtcagcggtggctgcgatcgcgac gttcgcgtatggaaccttgcgactggcttcccacaattcaccctgcgcggtcacacttct acagtacgatgcctgaagatgtccgacgcaaacaccgccatatccggctccagagatact acgctgcgcatctgggatctgaagaagggcctatgcaaacatgtcctaattggtcatcag gctagcgtccgatgccttgagatccacggcgacatagttgtgtccggcagctacgacact actgcgaagatttggagcatctcagagggcaagtgcctgcgcacacttactggccacttt agccagatctatgccattgccttcgatggcaagaagattgcgactggaagtctggacacc agtgtccggatatgggatccaaacgatggcaaatgtttggctgtgctacagggccacacc tctcttgttggacagctccaaatgcgcgacgatattcttgtgacaggtggttcagacggc tctgtccgcgtgtggagccttgcaacctaccaagccattcatcgattggccgctcacgat aacagcgtgacgagtttgcaattcgataatacgaggatagtcagcggtggtagcgatggc cgcgtcaaggtttgggatctcaagaccggagttccagtgagagagttgagcagtcctgct gaagccgtctggagagttgtcttcgaagaagagaaggccgtcatcatggccagccggggc ggtcggaccattatggaggtgtgggacttttcaccgcccgccgaagaagacttcgactct cgatcctccactcctgcaagcatgccagagcatctcgaagttgaatacaatcgtccgcga tctgccattctccccacgacatccccgcttgtacaggaccatagcgtcggtgacgtaacc atggccgacgcgaacgattcgtaa

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