Pyrenophora tritici-repentis: 6348001 Help Entry 6348001           CDS       T10215                                  Symbol PtrM4_129980 Name (RefSeq) CAF1 family ribonuclease   KO K01148   poly(A)-specific ribonuclease [EC:3.1.13.4] Organism ptrr  Pyrenophora tritici-repentis Pathway ptrr03018   RNA degradation Brite KEGG Orthology (KO) [BR:ptrr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     6348001 (PtrM4_129980)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ptrr03019]     6348001 (PtrM4_129980) Enzymes [BR:ptrr01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.13  Exoribonucleases producing 5'-phosphomonoesters     3.1.13.4  poly(A)-specific ribonuclease      6348001 (PtrM4_129980) Messenger RNA biogenesis [BR:ptrr03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      6348001 (PtrM4_129980) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CAF1 DEDDh_C PUS7L_N Motif Other DBs NCBI-GeneID:  6348001 NCBI-ProteinID:  XP_001940039 UniProt:  B2WI98 LinkDB All DBs Position 7:1551365..1553315 Genome browser AA seq 634 aa AA seqDB search MDVDAASFPHHLLGLMVNISEADFVSFDLELSGIPSRIQDKPARGSGRLTLEERYAETKM GADRYQILQVGITCARFDYIADKYVLRPYNISISPLLDERLDFEREVRFQTGACTFLLNN GFDLGAPFAKGVQYLSREEAERAKQMAWDRLDNKNPIPDLQLKEEDVESLDFMRRIREAI KTWKTSKALHLDVTTHTGLPDKPAMPVITRFEKRLVHQLVRAEFPELVTIGRSECVRIVD LDPVREADNMRRIKNRVRESIVRQTGFRWVFEALVKGGAVDRADLLYVARTTGMPMTADM YAIRDRYDRAVERLKTKQPVLVGHNMFTDIVYLYRTFVGQLPDTLQGFQDAIHGLFPKII DTKYLATHAEGDLNASPTLQDIAMRLNTQPLPHIITHADYPKYQDTEAFHEAGYDSLLTA TIMIKLAAKLGAERGEEVPAPLSGIPLGKSKTSTPEPNPTISDEIKTPAEDSAEYIEDMV KDGREKVQKPVPLPPVEKPKPAKANKRTQNKKGGKKNKETEQRRFETRNMFDSLREMTLN PETGSSSNEDEPRHDSHIQDNQSATWDKQAEATGSWENDVHVQDKTGWVPVEQVKRQSGE LIPAFNSKFWCEFGNTLRVFGTEEAVLKIADWED NT seq 1905 nt NT seq  +upstreamnt  +downstreamnt atggacgtcgacgcggcttccttcccccaccacctgctgggtctcatggtaaatatctca gaggccgacttcgtatcctttgatttggagctatcaggcatcccttcgcggatacaggac aaacctgcacgtggctccggacgcttgaccttggaagagcgctatgccgagactaagatg ggagcggaccgttaccagatcctacaagtaggcatcacgtgtgccagattcgactacatt gccgacaaatatgttttgcggccttacaacatcagcatcagtccattactcgacgagcga ctggacttcgagcgcgaagtcagatttcaaactggcgcctgcacatttctcctcaacaat ggcttcgacttgggcgctcctttcgcaaagggcgtgcagtatctctcacgagaagaggcc gagcgagcgaagcagatggcatgggatcgcctggacaacaagaaccccattcctgatctt caactcaaggaggaggacgttgagtcgcttgactttatgcgccgtatcagggaggccatc aagacgtggaagaccagtaaggctttgcatttggacgtgacaacccataccggccttcct gataagcctgccatgcctgtcatcacccgattcgaaaaacgcctcgtacatcagcttgtc cgcgccgaatttccagaattggtcaccataggccgctcagaatgtgttcgcattgtcgac ttggatccggtgcgcgaggcagacaacatgcgcagaatcaagaaccgcgtcagggaatcc atagttcgccaaacaggctttcgttgggtcttcgaggctcttgtcaagggtggtgctgtc gatcgtgcagatctgctgtacgttgcacgcactacaggtatgccaatgacagccgacatg tacgccatacgagacagatacgacagggctgtagagaggctcaagactaaacagcctgta ctcgtcggtcacaacatgttcaccgacatcgtctatctataccgcacttttgttggacaa ctaccagacacgctgcaaggcttccaggacgccatccatggactatttcccaagattata gacacaaagtacctagctacgcatgctgaaggtgacctcaacgcctcgcctacgctacaa gacatcgcaatgcgtctcaacactcagcctctgccacacatcatcactcacgccgactac cccaagtaccaggatactgaagctttccacgaagccgggtacgatagcctcttgaccgct acaatcatgatcaagctggcggctaaacttggtgctgaacgtggagaggaggtacccgcg ccgttgtcgggtattcctctgggcaaatctaaaacttcaacgcccgaacccaacccgacc atttcagacgaaatcaaaacgccagctgaagactctgcagaatacatcgaggacatggtg aaggatggacgcgaaaaagtgcagaagccagtgccgctcccaccagtcgaaaaaccaaag cctgcgaaagcgaacaagcgcacgcagaacaaaaaaggtggcaaaaagaacaaggaaaca gagcaacgacggttcgaaacaagaaacatgttcgacagtcttcgagaaatgacgctgaac cccgaaactggctcatcttccaacgaagacgagcctcgccatgacagccatatccaggac aatcagtcagccacgtgggacaagcaggcagaagctaccggatcatgggaaaatgatgta catgtccaggataagacaggctgggtgcctgtggaacaggtcaaacgacagtcgggggag ctcattcccgccttcaactcaaaattttggtgcgaatttgggaataccctgcgtgtcttc ggtacggaagaagctgtgctgaaaattgcggattgggaagattaa

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