Pyrenophora tritici-repentis: 6348020
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Entry
6348020 CDS
T10215
Symbol
PtrM4_087160
Name
(RefSeq) ZipA, Cell division protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03250
Viral life cycle - HIV-1
ptrr03272
Virion - Hepatitis viruses
ptrr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
6348020 (PtrM4_087160)
03272 Virion - Hepatitis viruses
6348020 (PtrM4_087160)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
6348020 (PtrM4_087160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6348020 (PtrM4_087160)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrr04147
]
6348020 (PtrM4_087160)
Membrane trafficking [BR:
ptrr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
6348020 (PtrM4_087160)
Exosome [BR:
ptrr04147
]
Exosomal proteins
Proteins found in most exosomes
6348020 (PtrM4_087160)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
HAUS-augmin3
STB2_C
NTP_transf_5
CCDC170_1st
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
6348020
NCBI-ProteinID:
XP_065963688
LinkDB
All DBs
Position
3:complement(<3502349..>3504213)
Genome browser
AA seq
571 aa
AA seq
DB search
MSQAVPDKVLNWLYSVLLAEYLDVNRTYHDAAETLSAHASLSPKTELYTYENGASALLLL
LTGTLPVTFRGATYGFPVAIWVPHDYPREPPMVYVTPSHDMVLRPGQHVSTDGRVYHPYL
AQWAKYWDKSTLFDFLAVLRGVFSKEPPVRSRQQQPQYNTPAQQAPPPVPPPPEEWRRSV
HSASGASPSPAHPGQPPAPPPKPPKPHEQSQHTPQPPHDRYSQPPPLPPHIPQPQPFHHL
QRNTWQELPLGQQYAPSRQGSYDISPATPVSRHQHPQAQGYPQQTVDLGSPVSPIVADGH
RAGFQKSAPPQPPGFQHVQQHQGPPVPQQQQQQYGGPPPPHQQYQQPPQGYPPQQHPQYQ
QYPQQQAPPAPKPPVDLLDDSLEVTLPSQSENQIPLPVPPVPPNPEKDALLQALSQTLVS
QIQQTVASNTAAVAPLRAQQAALQNAYSRLQAELGELQQLDAALASNEQVLKGAMIEADR
VMEDARRRKAPDVDDVLVAPTVVGGQLYTLAAEERGISDALFVLGRALDKGRISTDVFVK
QTRSLAREQFLKKALIKKIAKGMALDEYQMR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggccgttcctgataaggttctcaattggctatacagcgttctcctcgccgaa
taccttgatgtaaatcgcacctaccatgacgctgccgaaacgctctccgcgcatgcttca
ctcagcccgaagacggagctttacacatacgaaaacggcgcctcggctctcctgctcctc
ctcacaggcacactacctgtcacgttccgtggcgcgacgtacggcttcccggtagcgata
tgggtgcctcatgactaccctcgagaaccgccaatggtatatgtgacgccgtcgcatgac
atggtattgaggccgggtcagcatgtgagcaccgatggccgagtctaccatccatacttg
gcgcaatgggcaaagtactgggacaagtctacactcttcgacttcctggcagtattacgg
ggtgtcttttcaaaggaaccgccggtgcgatcgagacaacagcagccgcaatataacacg
cctgcgcaacaagcacccccaccagtacctccaccgcccgaggaatggcgacgttcagta
catagtgcctctggcgcatccccctcaccagcgcatccaggccaaccgccagctcccccg
ccgaagccgccgaaaccccatgaacagagccaacatacaccgcaaccgcctcatgacagg
tattcgcaaccgcctccgctaccgccgcatattccacagccacaaccatttcatcatctc
cagagaaatacatggcaggagctgccgctaggtcaacagtatgcgccgtctcgccaaggg
agctacgacataagcccagcgacaccagtgtcaaggcatcaacacccacaagcacaagga
tacccccaacagactgtcgaccttggcagccctgtaagtcctatagtggccgatggtcac
cgagcgggattccagaagtcagctcccccacaaccacctggatttcaacatgtccaacag
caccaagggccaccagttccccaacaacaacaacaacaatacggcggtcctccaccacca
caccagcaataccagcagccgcctcaaggctacccaccacagcaacatcctcaatatcaa
caatatccacaacagcaagcaccaccagccccaaagcctccagtcgaccttctcgatgac
tcgcttgaagttaccttgccgtctcaatcagaaaaccagatcccattgcctgtgcctcct
gtaccaccgaaccctgaaaaggatgcacttctccaagccctaagccaaacgcttgtatca
cagattcaacaaacagtggcatctaacacggctgcagtggcaccactccgtgcgcaacaa
gcagctctacagaacgcatactccagattacaggccgaattgggcgaactgcagcagctt
gacgcggcgcttgcttctaatgagcaagtgttgaaaggtgctatgatcgaggctgatcga
gtcatggaggatgccaggaggagaaaggcacccgatgtggatgacgtgctagtagcacct
accgtggttggagggcagctatacacgcttgctgcggaggagagaggtatatcagatgcg
ctgtttgtcctgggacgagccttggataaggggcggattagtacagacgtttttgtgaaa
caaaccaggagtcttgcccgcgagcagtttctcaagaaggcgctgattaagaagatcgca
aagggtatggctttggatgaataccagatgcgatag
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integrated database retrieval system
