Pyrenophora tritici-repentis: 6348146
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Entry
6348146 CDS
T10215
Symbol
PtrM4_085840
Name
(RefSeq) Rep-fac-A-3 domain containing protein
KO
K10740
replication factor A3
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03030
DNA replication
ptrr03420
Nucleotide excision repair
ptrr03430
Mismatch repair
ptrr03440
Homologous recombination
ptrr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
6348146 (PtrM4_085840)
03420 Nucleotide excision repair
6348146 (PtrM4_085840)
03430 Mismatch repair
6348146 (PtrM4_085840)
03440 Homologous recombination
6348146 (PtrM4_085840)
03460 Fanconi anemia pathway
6348146 (PtrM4_085840)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrr03032
]
6348146 (PtrM4_085840)
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6348146 (PtrM4_085840)
DNA replication proteins [BR:
ptrr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
6348146 (PtrM4_085840)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
6348146 (PtrM4_085840)
MMR (mismatch excision repair)
6348146 (PtrM4_085840)
DSBR (double strand breaks repair)
HR (homologous recombination)
6348146 (PtrM4_085840)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
6348146
NCBI-ProteinID:
XP_001940182
UniProt:
B2WIP1
LinkDB
All DBs
Position
3:complement(<3159600..>3160127)
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AA seq
107 aa
AA seq
DB search
MDHLQTPRVLAPHLSNFQHRIVRILGKVVSLRGETAVIDAGGNVDLILNRDSHLALNHAV
EVIGKVDQNLHVKVQAATDFGTDIDFNAANAVVEATHRYKEIFYDDN
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggaccacctccagaccccgcgtgtcctcgccccccacctctcaaacttccaacaccgc
atcgtccgcatcctgggaaaagtagtatcgctccgcggcgagactgctgttattgatgcc
ggtgggaatgtggatttgattttgaatagggactcccatcttgcgctcaaccatgcggta
gaagtcatcggcaaagtcgatcagaatttgcatgtcaaggtacaagctgctactgacttt
gggacggatatcgatttcaacgctgcaaacgcagtagtggaagccacacatcggtacaag
gagatcttctacgacgacaactga
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