Pyrenophora tritici-repentis: 6348323
Help
Entry
6348323 CDS
T10215
Symbol
PtrM4_083680
Name
(RefSeq) SrmB, Superfamily II DNA and RNA helicase
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
ptrr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6348323 (PtrM4_083680)
03015 mRNA surveillance pathway
6348323 (PtrM4_083680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6348323 (PtrM4_083680)
Enzymes [BR:
ptrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6348323 (PtrM4_083680)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6348323 (PtrM4_083680)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
6348323
NCBI-ProteinID:
XP_001940356
LinkDB
All DBs
Position
3:<2614460..>2616017
Genome browser
AA seq
486 aa
AA seq
DB search
MASTEETPIKQEAEAPAAEAPVEETPAQEPESSLETDQVDGAGAPAKGADLVDTPYKVEV
KLADLQADPNNPLFSATSFEELKLSEALLKGVRNMNFRKPSKVQEKALPLLLMDPPQNMI
AQSQSGTGKTAAFSLNILSRIDLSNPNPQALALAPSRELARQILGVITHMGQFMDGLTTM
AAVPDPSRKGQAYNAQVLVGTPGTVQDMLRRRLINNKSIKILVLDEADNMLDQQGMGEQC
TRVKALLNKDIQTVLFSATFPPNVIAYAKRFAPNANLITLAHDELTIEGIKQLYIDIDKD
NDKYSTLLKFYGLMTQASSIIFVRTRRTAEELEKRMVAEGHKVAQLSGALEGPERDRIID
QFRSGEAKVLITTNVLARGIDVESVTMVINYDVPTMANGIDADPETYLHRIGRTGRFGRV
GVALTFIHDKNSWQQLHNIASYYKTELYPIDTSDWDAVEDMIQKIIKSSRAGKSTEEMTE
MITKGS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcatccactgaggagacacccatcaagcaagaggctgaggccccggcggcagaggct
cccgtagaagagacacccgcgcaagagcctgaaagctcgctcgagactgatcaagtcgat
ggcgctggcgcaccggcaaagggtgctgatttggtcgacaccccatacaaggtagaggtc
aagcttgccgacttgcaggcagaccccaacaaccctctgttctcggccacgtcgtttgaa
gagcttaaactatccgaggcgctgctgaagggcgttcgcaacatgaacttccgaaaaccc
tcaaaggtccaagaaaaggccctgccgctgcttctgatggacccgcctcaaaacatgatt
gcgcaatcccaatcaggaactggcaagacagctgccttttcactgaacattctctctcgc
atcgacctttcgaaccccaatccgcaagcactcgcgctcgcacccagccgagagctcgcc
cgtcaaattctaggcgtcatcacacacatgggtcagttcatggacggtctcacaactatg
gccgcagttcctgatccgtcaaggaaggggcaagcatacaatgcccaggttcttgtcggc
acaccagggacagtccaggatatgctgaggcgccgtctgatcaacaacaagtccatcaag
attctggttctggacgaggctgacaacatgctggatcagcagggcatgggtgagcagtgc
actcgtgtcaaggcgctccttaacaaggatatccaaactgtcctcttctccgctactttc
ccacccaacgttatcgcatacgccaagcgcttcgcacccaacgccaacttgatcaccctg
gcgcacgacgagctgactatcgagggcatcaagcagctatacatcgatatcgacaaggac
aacgacaagtactcgactctactcaagttctacggtctgatgacacaagcctcatcaatc
atcttcgtccgaacccgaaggaccgctgaagagctcgagaagcgcatggttgcagaaggc
cacaaggttgcacaactcagtggtgctctcgaaggtcctgagcgtgatcgcatcatcgac
cagttccgctctggagaagccaaggtgctcatcactaccaacgtgctcgctcgtggtatc
gacgtcgagtctgttaccatggtcatcaactacgatgtacccactatggcaaatggaatc
gacgcagacccggaaacctaccttcaccgcattggtcgtaccggtcgctttggacgtgtc
ggtgtcgccctcaccttcatccatgacaagaacagctggcagcaactgcataacatcgcg
tcctactacaagactgaactgtatccaatcgacacttcagattgggacgctgttgaggac
atgatccagaaaatcatcaagtcatcacgagccggcaagagtaccgaggaaatgacggag
atgattacgaaaggatcgtag
DBGET
integrated database retrieval system
