Pyrenophora tritici-repentis: 6348338
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Entry
6348338 CDS
T10215
Symbol
PtrM4_083520
Name
(RefSeq) RNA exonuclease 3
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
6348338 (PtrM4_083520)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrr03009
]
6348338 (PtrM4_083520)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
Pre-60S particles
RNases
6348338 (PtrM4_083520)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REXO3_N
RNase_T
zf-CCCH_9
REX3_middle
Motif
Other DBs
NCBI-GeneID:
6348338
NCBI-ProteinID:
XP_001940371
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All DBs
Position
3:<2581991..>2583967
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AA seq
658 aa
AA seq
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MWPSIPAYRSFASIACPSAATCELPNCIFSHDALKKTTARRSPVPVTTTYDREQNAKRLK
LEDDVKERVVQDVPVPAKTKPDIFVDLTKDKATPAVKNATTVKTAPSKTHPMNDTPPALP
SSATRPISPPPAATMAKAVINPDAPVALLPRKLNKEPANFTKRVTLLKALHGYMKPQNDK
LLKAVKPEIRALHLSANQLNKLAVDEEEKIATSNPSVYENILKQRLMKLKTMTPEVWVKE
RREAMAKQSGEPAKKPPPKKVHTGLTPKEEVTFLSVLKCPQEGLDAHGYVTKLPADADLT
ETHSALELADCWEQCDRCSTRFQVFPERREEDGMFTTGGECKYHWGKRIFPKKSRGAPAE
PTRLTCCSAEVGSPGCTTHDTHVYSVKNSKRLSLIMPFIETPENEKVPEKSAVCFDCEMG
YTTNGLEMLRLTAISWPQHKPLVDVLVRPLGHLLDVNTRFSGITMDQFVNAKPYDPENPK
PIRKDLRIVESPYVARDLFLSHVSPQTPVVGHALENDLNTIRLIHPNIIDTVLLFPTRQG
LPFRHGLRKLAKDYLEEDIQQGGAAGHDSFEDARTTGELVRFKVKEKWQLMKAEGWEIRD
DGVHPPIPAEAPPKHAPSAPSMVPEAKMAVLEGAPAVKRKIEEDGTLNKLPAKKLEEE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtggccctcaatacccgcatacaggagcttcgcaagcatagcatgtccatcggcagca
acttgtgagctacccaactgcatcttcagtcatgatgcgttgaagaaaactacggcacgg
cgctccccagtaccagtcacaacaacatatgatcgcgagcaaaacgctaagcgcctgaag
ctcgaagacgatgtcaaggagcgtgtggttcaggacgttcccgtgcctgccaagacaaaa
ccggatatctttgttgatttgaccaaggacaaagcaaccccagcagtcaaaaatgcgact
acagtcaagacagcaccttcaaaaacacatcccatgaatgatacacctcctgcgctcccg
tcgtctgcgacgcggccaatatcaccaccccccgctgcaaccatggccaaagctgttatc
aatcccgatgctccagtcgctctattgccacgcaaactaaacaaagagccggcaaacttc
actaagagagtcactctcctcaaagcgttacatggttatatgaaaccgcaaaacgacaag
ctgctcaaggcagtcaagcctgagataagagctctgcacttgtctgcaaaccaactcaat
aagctggcagtcgacgaggaagagaaaatagctacatcaaacccttcagtatatgagaat
attctgaagcagcggctaatgaaactcaagaccatgacaccagaagtatgggtcaaggaa
aggcgggaggctatggctaagcagagtggagagccagcaaagaagccaccgcccaagaaa
gttcatacaggactgacaccgaaagaagaagtcacgttcctctctgtcctcaagtgccca
caggagggtctggatgcgcatggttatgttacgaaactgcctgcagacgctgatttgacc
gagacacattcagcactcgagttagctgattgctgggaacaatgtgaccgctgcagcact
cgcttccaagtatttccggaacgaagggaagaagacggtatgtttacaacaggaggagaa
tgcaaatatcattggggcaaacgcatctttcctaagaagtcaagaggtgctcccgcagaa
ccaacccgcttgacttgctgtagcgccgaagtgggttcacccggctgcactacccacgac
actcatgtctatagcgtcaaaaactccaaacgactttccctcatcatgccgttcatcgag
acgccagaaaatgaaaaggttcctgagaaatcggctgtttgcttcgactgtgagatgggt
tataccaccaatggcctagagatgcttcgtctgacggccatatcatggccacagcacaag
ccactcgtggatgttctggttcgtcctctgggtcatttgttagacgtcaacacccgtttc
tctggtattaccatggatcaattcgtcaacgccaagccctacgacccggaaaatcccaag
cctatccgcaaagacctccgcatcgttgagtcaccgtatgtagcacgcgatctcttcctt
tcccacgtctctccccagacaccggtcgtaggtcacgccctggaaaacgacctcaacact
atccgcctcatccatcccaacatcatcgacaccgttcttctgtttccaacacgccaaggc
ctgccttttcgccatggtctgcgcaagctcgcaaaagactaccttgaagaagatattcag
cagggcggggccgccggacacgacagttttgaggatgctcgaaccacaggcgaattagtt
aggttcaaggtcaaagagaagtggcagcttatgaaggcggaaggatgggagataagggat
gatggtgtacatccgcctatacccgccgaggctccgccaaagcatgctccgtctgctccg
tccatggtaccagaggccaagatggcggtccttgaaggggctccagcagtcaaaaggaag
attgaggaggatggaactcttaataagcttccggctaagaagctggaggaagagtga
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