Pyrenophora tritici-repentis: 6348349
Help
Entry
6348349 CDS
T10215
Symbol
PtrM4_083390
Name
(RefSeq) RNA-binding protein Puf family, translational repressor
KO
K14311
nuclear pore complex protein Nup188
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6348349 (PtrM4_083390)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6348349 (PtrM4_083390)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6348349 (PtrM4_083390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Nup188_N
Motif
Other DBs
NCBI-GeneID:
6348349
NCBI-ProteinID:
XP_065963516
UniProt:
A0A317ADF5
LinkDB
All DBs
Position
3:2550222..2555923
Genome browser
AA seq
1884 aa
AA seq
DB search
MAPNQLPEFDVGKCLKGEQQLVTWDIAYRALCDPETASKSEALRAFLTASENTGILSRPW
KPFADPSPQEETKFETKTSPICVTPAKSDHYDVAEIKEDTLWLSKEAQISEYAALRLVVQ
EWQGRPTAQLLSGLTEEEALSVQEAAGVANLGASTFVSNSSILATPLASKTAHLETKHQR
RLRILDLYHSTCASIIRISQLLVSWGCASSLRNQTIYGNDYLSIGAGWIEELGQAITAAQ
DGAGNGKALDECLRAFSTRCDALDTGYGWDVDEAIIGAASEKWVVAQTTELLHILHLALV
HADLVVKDFLPAATIEDWLKAFNFRGFFREFPAVTPRQEPLIPVIQLLTSLMSLTILKVD
KIMDDLESGDCNTWHPSSYILNSAVVESITTIFGEAKLLGASPATPPIFAWAILTWKLTS
RAGYQEEERMRLLEASDGAGNQESEPSVLEEAALTVGRLESHELFDGKMPFEDLATACSA
VGVLAIVNQLVEMSLPAFGTSIDRITQDRIRLLFLHLVRAAVGSDIVAYSPDLIVTAYTI
LAGDNTFRKWENGEVSRHADPVVAYFLEDEYVLRPQLLNEARLRYPYEMVPFLKFCSALT
RGDKTMQNGMPTFVDKLANHNRLMQRLPDGFNGYALTREEENLNWVELTADLPLFSSGAS
SGFRGQRRLLTSGASIQSHGLSVIPAGTEGMIVDDNSVPYVAVWHHQHSTLSYLVELLST
YPVGSSKVETATQQPASRESVVEVVGLFADLIHSSLHTSDGVCSPEFLETIGIGAEGSHD
TISLVLAIFEEELLHLCQEPSDDLSLELLVNCTHFLEALVIIAPQRVWPWLARSKLLEGD
GNGSLATILIGTEMVLGRYDFLIGCIRLYRGLVKDAVGRSVSRKVPTKALSRFNALAPSE
SGTSDKIMSTILFTFGRTLASVYETSLSWKYSQPNHRPEINIAICEVFRTILDLAYSVDD
SPQLSAKLTKPIAPIAEYITQLYLTRSDAERPANPLMTSLLIGVSPSDTTLLTTSTALWN
QQTQTTLAFADVLVRIAILHNKPWTHLEQQLFKATPLLARLYATSDKWKSQVVLLLEALV
RGAVRVTEQDDSEMADGDLKLSTRKKAEHREPPSLLGHLGPRTAKNFLSVLSQLDEPLRI
VDIQTNVWNLLSAVVTCKQQWFSLFLLNGSTPREFIRSKKDATHDSRNKALLTRALDALS
DMPLPEKEPSGLPWPLYTAMLEFVSSAQNNWSWAMGDLRQRKDLIQKLLAFLKWMAKQPK
QPRMSNNIETLERSFENRFASLACEVIAMYLHSSRQAGDITVLKEVVPALTYLQDMALDL
PSYSTSLHSYLKQNLEQQYPGVLLSNFKRTTLYPETFGRAFFYHVDLAQQLLGFNSKWAG
PREGTGFASEVEKANYNLGLVESQVLLLHGWKLLALELSQVFAKDERIVKVLTGVISKCM
NANSQSNLPEALFGQLMIVRADLSLALLKKLVEAKVRTTEARQLLGPVWKAIRQSTPDFD
NVFSSDSVHYYRSLLRILYLVLHFHLIDDTDQSEDANFRSSFRGTMPTSHNTYTEPISTQ
LLEILQDTVAKGFRSLATQLHTDPATVSPSDFALLTALLQRIIAIPEMSKWQQQAALQFA
NSNTVRYATSLFSWADRLTIPHQQHASGMPDPIYGELSILFILSLSSIPTLAETMAVEGI
LSQLNTANIMQYFRRPCGSGPFDNPPRMHSIWTKGILPLCLNLLLSVGPPIAAEISGFLN
QFPKQLARSVGSINSNPPSSRNPAASKITAAIASEIHSLALLHSILENVRKQGPKLGIQA
NEVESLDWDHEAVKEDVESWLGRKGALRERIVATDERELELLGKRNGEGEDALSLLESRI
LEELEDAGRCLGVGNGNGNGGAKK
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaatcaattgcccgagttcgatgtgggcaagtgccttaaaggcgaacagcag
ctggtgacgtgggatatcgcctatcgcgccctttgcgacccggaaaccgcatccaagagc
gaggccctacgcgccttcctcaccgctagcgaaaacaccggcatcctcagccggccatgg
aagccctttgcagacccatcgccgcaggaagagacgaaatttgaaaccaaaacctcgccc
atttgcgtcacacccgccaagagcgaccactacgatgtggctgagataaaagaggatact
ttgtggctatccaaagaggcgcaaatctcggaatatgcagccctgcgactggttgtccaa
gaatggcagggcaggccaaccgcccagcttctgagcggcctgactgaggaagaagcgctc
agcgtacaggaagcggcaggtgttgcgaacctaggagcctcgactttcgtctcaaactcg
tccattctcgctacaccgctcgcctcaaagacggcgcatctcgaaaccaagcaccagcgt
cgcctccgtattctcgatctatatcactccacatgcgcctccatcatacgcatcagccag
ctcctcgtttcctggggctgcgcgtccagcttgcgcaaccaaacaatttacggcaacgac
tatctcagcatcggtgcaggctggatcgaagagcttggccaggctattacagcagcacaa
gatggagcgggaaatggaaaagcgctagacgagtgcctcagggcgttttcaacgagatgc
gatgccttggataccggttatggctgggatgtggacgaggccataataggcgctgcttcc
gagaagtgggttgtcgcccaaaccaccgagctgttgcacattcttcatctggccctagtc
cacgccgacttggttgtcaaagactttttgcctgcagccaccattgaggactggctcaag
gcatttaatttccgcggcttctttcgcgagtttccagcagtcacgcctcgccaggagccc
ctcatcccagtcatacagctcttgacctccctcatgtcattgaccatcttgaaagtggac
aagatcatggacgacctggaatctggagactgcaacacttggcacccctcgtcgtacatt
ctcaactctgccgttgtagagagcatcaccaccatatttggagaagcaaagctactgggt
gctagtccagccacaccacctatctttgcctgggccatcctgacttggaaactgacaagc
cgggcgggctatcaagaagaagaacgtatgcgtcttcttgaagcatcagatggcgctggc
aaccaggaatcagaaccttcagtgcttgaagaagctgcattgactgtcggaagacttgaa
agccacgagttgtttgacggcaagatgccatttgaggaccttgccactgcctgttcagcg
gtaggtgttctggctattgtcaatcagctcgttgaaatgagtttgcctgcgtttgggacg
tcaatcgaccgaattacccaagatcgcatccgtttgttattccttcatcttgttcgcgct
gctgttggcagtgatattgtcgcatacagtccggatcttatagtgactgcatacaccatt
ctagccggtgacaacactttccgaaagtgggagaatggcgaagtctctcgccatgctgac
cctgttgttgcatactttttggaagacgaatatgtcctcagaccgcaactactaaacgaa
gctcgcctgcgctacccctatgagatggttccattcctcaaattctgcagtgccttgaca
cgtggagacaaaacaatgcagaacggtatgcctacatttgtggacaagctcgcaaaccac
aatcgactcatgcaacgccttccggacgggttcaacggctacgcactaacacgtgaagaa
gaaaacctcaactgggtcgagcttaccgcagatcttccactgttctcttcaggggcttct
tccggctttcgcggtcaacgtcgcctactaacttcaggcgcctcaatacagtcacatgga
ctttcggtaatcccagccggcacagagggaatgatcgttgacgacaactccgtgccgtac
gtggcggtatggcaccaccagcattccacgttatcgtaccttgtggaattactgtcaacg
tatcctgtaggaagcagcaaggtggagactgctacgcagcagccggcatcgcgtgaaagc
gtggtcgaagttgttgggctctttgcagacctgatacactcttctttacacacatctgat
ggcgtatgctcgcctgagttcctcgaaacaatcggcattggcgccgagggtagccatgat
accatcagtctcgtgctcgcaatcttcgaagaggaactcttacatctctgccaggaaccg
agcgatgacttatcgcttgagctgttggtcaactgtacacacttcttagaggccttggtt
atcattgccccacaacgagtctggccttggctcgctcggagtaaattgctagagggcgat
ggaaacggaagcttggcaactatcttgattggcactgagatggttcttggacgatacgac
ttcctcatcggatgcattcggctatacagagggcttgtaaaggatgcagtgggaagatcg
gtatcacgcaaagtccctacaaaggcattgagtcggttcaacgcacttgcgccatccgaa
agcgggacttcggataaaatcatgagcactattctgttcacctttggtcggacacttgcc
agcgtttacgagacctcattgagctggaaatactctcagcccaaccaccgccctgagatt
aacatcgccatctgcgaagtcttcaggacaatcctggaccttgcctacagcgtagacgac
tcgccacaactatccgctaagctgacaaaacctattgcgcccattgcagagtacatcact
cagttatatctaacgcgttctgacgcagagcgcccggcgaacccactgatgacgtcgcta
cttatcggggtgagccccagcgacactacattgctcacaacatcgaccgcactatggaac
cagcagactcagacaacgctagcgtttgccgacgtgcttgtccgaattgctatactacac
aacaagccctggacacatttggagcagcaacttttcaaggccacgccactattagcacgt
ctgtacgctacgagtgataagtggaagtcgcaggtcgtattgttactagaggctctcgtg
cgcggcgccgtacgtgttaccgaacaagatgactcggaaatggcagacggagacctgaag
ctgtccacccggaagaaggccgagcatcgagaacccccttcgctacttggtcacttgggt
ccccgcactgcgaagaactttttgagtgtgctctctcagctagatgaaccgttgaggatt
gtggacattcagacgaatgtgtggaacctgctttcagcggtggtcacttgcaagcagcaa
tggttttctctgttcctgcttaatggaagcactccacgggagtttatccgtagcaaaaaa
gacgcaacgcacgattcgagaaacaaggcgttgcttacgcgagctctcgacgcgctatct
gatatgccgcttccagagaaagagcctagtggtcttccatggccgttatatactgccatg
ctagagtttgtgtcatctgcgcaaaacaactggtcatgggcaatgggcgacctgcgacaa
cgcaaagacttgatccagaagttgctcgcgtttcttaagtggatggcgaagcaacccaag
caaccgcggatgagcaacaacatcgaaaccctagaacgttccttcgagaacaggtttgcg
tctttggcttgcgaagtcattgccatgtatcttcatagttcgcggcaagcgggcgacatc
accgtactcaaggaagtcgttccagctttgacatatctacaagatatggccctggatcta
ccttcttacagcacgtcgttgcacagttacctgaagcagaacctggagcagcaataccct
ggtgttttgctatccaacttcaagcgaaccactctgtacccagaaacctttggtcgtgct
ttcttctaccacgtcgatctcgctcagcaactcctcggcttcaacagcaagtgggctggt
cctagagaaggcactggctttgcgtctgaagtcgaaaaggccaactacaacttggggctg
gtggagtcgcaagttctgctacttcatggctggaagctgctggctctggagttgagtcag
gtatttgcaaaggacgagcggattgtgaaggtactcactggcgtcatttctaagtgtatg
aatgccaattcgcagtcgaacctcccagaagctttgttcggccagctcatgatcgttcga
gcggacctgtcattagctttgttgaagaagcttgttgaggccaaagtccggacgacggaa
gcgcgccaactacttggcccagtatggaaagcaattcgccaatctacccccgacttcgac
aatgtgttttctagcgactctgtgcattactaccggtctctattgcgcattctctacctc
gtcttgcacttccatctcatcgacgatacagaccaatccgaggatgcaaacttccgctcg
agcttccgcggcaccatgcccacaagtcacaacacctacaccgagcctatttccactcag
ctcctcgaaatcctccaagacaccgttgccaaaggcttccgcagtctcgccacccaactg
cacaccgaccccgcaaccgtctcaccctccgactttgccctcctcaccgccctcctccaa
cgaatcattgccattccagagatgtcgaaatggcaacaacaagccgcactccaatttgca
aacagcaacactgtccgctacgccaccagtctcttctcgtgggccgaccgcctcaccata
ccccatcagcaacacgcctccggcatgcccgaccccatctacggcgaactaagcatcctc
ttcattctctccctctccagtatccccaccctcgccgaaacaatggccgtagaaggtatc
ctctcacaactcaacacggcgaacatcatgcaatatttccgtcgcccctgcggctccggc
ccctttgacaacccaccccgcatgcacagcatctggacaaaaggcatcctacccctctgc
ctcaacctcctgctatccgttggcccgcccattgcagcagaaatatctggtttcctaaac
caattccccaaacaactcgctcgctccgtcggtagcatcaattcaaacccgcccagctcc
cgcaaccccgccgccagcaaaatcacagccgccatcgcgagtgaaatccatagtctggcg
ctcttacatagcattctggagaatgtgaggaagcaagggcccaaactcggtattcaagct
aatgaggtggagagcttggattgggatcatgaggctgtgaaggaggatgtcgagtcctgg
ttgggcaggaagggcgcgctgagagagcgtattgtggcgactgatgagagggagttggag
ttgctgggtaagaggaatggcgagggtgaggatgcgttgagtttgcttgagagtaggatt
ttggaagagttggaggatgcagggaggtgcttgggtgttgggaatgggaatgggaatggt
ggggcgaagaagtag
DBGET
integrated database retrieval system
