Pyrenophora tritici-repentis: 6348619
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Entry
6348619 CDS
T10215
Symbol
PtrM4_076500
Name
(RefSeq) PRP8, U5 snRNP spliceosome subunit
KO
K12856
pre-mRNA-processing factor 8
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6348619 (PtrM4_076500)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6348619 (PtrM4_076500)
Spliceosome [BR:
ptrr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6348619 (PtrM4_076500)
Complex C
U5 SnRNP specific factors
6348619 (PtrM4_076500)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
Hom_end_hint
Hom_end
DUF536
Motif
Other DBs
NCBI-GeneID:
6348619
NCBI-ProteinID:
XP_065963166
UniProt:
A0A834RZQ4
LinkDB
All DBs
Position
3:complement(<674927..>684950)
Genome browser
AA seq
3155 aa
AA seq
DB search
MRPPIDPQIAKFAQKKRDWVRQQRQRFGEKRKAGFVETQKADLPPEHLRKVFRDIGDVSQ
KKFTTDKRSYLGALKFMPHAVLKLLENMPMPWESRRDVKVLYHTNGCLTLVNEVPRVIEP
VFHAQWAAMWLAMRKEKSDRRHFKRMRFPPFDDEEPPLSYSENIEDVEPLEPIQLELDED
EDRPVYEWFYEHRPLLDTPHVNGPSYETWNLDLPQMATLYRLSKQLLSETVDKNYFHMFD
MSSFQTAKALNVAIPGGPRFEPLYKDIDPNDEDFGEFNAMDRIIFRSPIRTEYKVSYPYL
YNSLPRSVKLAWYSYPQVVYVRAEDPDLPAFYFDPGINPISSRAVAPKNLSVSHEDFVFG
EDDEDDEDDFQMPEEMEPFMADEELSTPETASAIALWWAPHPFDKRSGRMVRAQDVPLVK
QWYLEHVPAGQPVKVRVSYQKLLKTFVLNELHKKPPQAQNKQNLMRTLKSTKFFQQTKLD
WVEAGLQVCRQGYNMLNLLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMR
EILRLTKLIVDAQVQYRLGNIDAFQLADGILYAFNHVGQLTGMYRYKYKLMHQIRSCKDL
KHLIYYRFNSGPVGKGPGCGFWAPAWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGV
AKTVTKQRVESHFDLELRAAVMSDLMDMMPEGIKQNKVNTVLQHLSEAWRCWKSNIPWKV
PGLPAPIENIILRYVKSKADWWISVAHYNRERIRRGATVDKTVAKKNLGRLTRLWLKAEQ
ERQHNYMKDGPYVSSEEAVAIYTTMVHWLEARKFQPIPFPSVSYKHDTKILILALERLRE
AYSVKGRLNQSQREELALIEQAYDSPGTTLARIKRFLLTQRAFKEVGIDMNDNYSNINPV
YDIEPMEKITDAYLDQYLWYQADQRHLFPAWIKPSDSEVPPLLTYKWAQGINNLDKVWES
QDGECNVLIETQLSKVYEKIDLTMLNRLLRLIMDHNLADYITAKNNVQLNYKDMNHVNAY
GMIRGLQFSGFVFQFYGLVLDILLLGLQRANDIAGAPESPNDFLQFKDKETEVRHPIRLY
TRYIDRIWVFFRFTAEESRDLIQRFLTENPDPNFENVIGYKNKKCWPRDSRMRLMRHDVN
LGRAVFWDLKNRLPRSVTTIEWEDTFASVYSRDNPNLLFSMNGFEVRILPKIRNTTGEFP
TKDSVWSLVDNSTKERTADAFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTTLI
ALFTYYREAAVSTVNLLDTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMI
SGSHILIPASDKQWHKQTDTGITHFRAGMSHDEETLIPNIFRYIIPWESEFVDSQRVWME
YSQKRQEAQQQNRRLTLEDLEDSWDRGLPRINTLFQKDRSTLSFDKGFRARTEFKIYQHM
KSNPFWWTSQRHDGKLWALQDYRTDVIQALGGVETILHHTLFQATAFPSWEGLFWEKACL
QNGTKLLRYDATEVAVEEVKDGDLLLGPDGGPRVVSNVVSGTDHLYRIKIGGRKEDLVVT
SNHILVLHREKGAGNVYAEPSTEDHHCRFSAQLDDLPDPSSDPAAADRPNNLVKARTNFI
SAFKSALAWLLKAERGKKGADTVRNTLNGTTGITSRQESYIVNIPVGKGSRAEYATFAWG
NPDRTNIQGHANHPPTFFATKDLAFAAAVAKSREIHARDGVTLANLRQRFEDKSADGKGG
EIRLDAGLPNMFLLWNKNGSGLKIRVYCSRNYTKYGRSYSFPALPDDNAAGVEDSEDEED
DLLDTELDSVPISASERYDTVEMTAQEFASVDPTIQSKYRLFRCPGFDLPESDVPVHPYF
LGLWLGDGSRTSTTIYSNHEREVREFLSNYAAELDLHFVWHGGLNYATVGRTRLADRPLP
TVKEGKAPARPAVRHARQTIIKQRLAGGWTFQENRGPRELRLWIRPGGLIEKDGQKRGRS
ESIPLSPEPHQRPRLVTSSSSHPQPASSIGWHEAASLRADISALANSIPVEPLSEILSDP
ELMSMAGPANVPDETTQSAFEADEEDDLNEYLDLIEAESADEMSDDEDLSSDDVHIINHD
TGGRPSHYERQRVTRLGAGRRVHGDLLPEEQDELVNEIVEHDENATAENSTGVNKLLVAL
RKLGVMPPPGETGHEVDRKHIPTAYMKNSRAVRLAVLAGLLDSDGWYVYPENMFGFAQSA
LWHKTLFWNTVALARSLGFSVWTTERDMWNPNRTKKTPHFFAQISGNLSEVPCLLTRKKA
CERYIPQMHSFVIKDITLESSPTGWSGFKVDQDQLYLRHDYIVLHNSGFEESMKFKKLTN
AQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAH
LWQKIHESVVMDLCQVFDQELEPLGIETVQKETIHPRKSYKMNSSCADILLFASHKWSVS
PPSMLHDTKDTMSATTTNKFWIDVQLRYGDFDSHNIERYVRAKYLDYTQDSMSIYPSATG
LMIAIDLAYNLYSAYGQYFPGLKQLIQQAMAKIMKANPALFVLRERIRKGLQLYASESSQ
EFLNSQNYSELFSNQIQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK
IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLLDFP
NISIRASELQLPFQAAMKVEKLGDMILRATGPQMVLFNLYDEWLKTISSYTAFSRLILIL
RALHVNQDKTKLLLRPDKTVITQEHHIWPSLADEDWVKVEVELRDLILLDYGKKNNVNTS
SLTSSEVRDIILGMEISAPSMQRQQAAEIDKQQEEQQQLTAVTTKTQNVHGEEMVVTTTS
QYEQASFASKTEWRTRAVATSNLRTRANNIYINSEDVKEEDHFTYVMPKNVLKRFITIAD
LRVQVAGYLYGKSPPDNNQVKEISTIVMIPQVGNTRDVQLPKELPKHEYLEDLEPLGIIH
TVSGNEPPYMQASDVTQHARLMNRHASWDKKTVSMTVSFTPGSVSLAAWALTPNGYKWGV
ENKDTMSDNPTGFSTSFGEKCQLLLSDKIRGYFLVPDNGIWNYSFMGSAFGTVEKKPVHV
RLDTPVRFYDAVHRPLHFHNFAELEDVWVDRENQM
NT seq
9468 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgccaatcgatccccagatcgccaagtttgcgcagaagaagagggattgggta
cggcagcagcgccagaggttcggtgaaaagcgcaaagccggattcgttgagacgcagaag
gcggacttacctcccgagcatttgcgcaaagtcttcagagatatcggcgatgtttcgcag
aagaaattcactacggacaagcgaagctatctcggtgcgctcaagttcatgccgcacgca
gtccttaagctgctcgagaacatgcccatgccatgggagagtagacgagacgtaaaagtc
ctctaccacaccaatggttgcctgacactcgtcaacgaggttcctcgcgtcattgagccc
gtctttcacgcacaatgggccgccatgtggcttgccatgaggaaggagaagagcgaccgt
cggcacttcaagcgtatgcgtttccctcctttcgatgacgaagaaccgccgctgtcgtac
tcggagaacattgaagacgttgagccactggagcctattcagctcgagcttgacgaggac
gaagaccgtccggtttacgagtggttctatgaacatcgccctcttctcgataccccgcat
gtcaacggacccagctacgagacctggaatctcgaccttccccagatggcgacactctac
cgtttgagtaagcagcttctcagcgagactgtggacaagaattatttccacatgttcgac
atgagcagctttcagactgcaaaggcgcttaatgtcgctattcctggaggaccacgcttc
gaaccgctgtacaaggacatcgaccctaacgatgaggacttcggcgaattcaacgccatg
gaccgtatcatattccgatcgcctatccggactgagtacaaggtgtcgtacccctatctt
tacaactccctaccgcggagtgtcaagctagcatggtattcgtaccctcaagtcgtctac
gttcgagccgaggacccggatctaccggcattttactttgatcccggaatcaacccaatc
tcttccagggcagtggccccaaagaatctttctgtgagccacgaggattttgtttttggt
gaggacgatgaggatgatgaggacgacttccagatgccagaagagatggaaccattcatg
gcggacgaggaactttcgactccagagactgcatcagcaattgcgctctggtgggcccca
catccctttgacaagcgctcgggtcgtatggttagggcacaagacgttcctctggtcaag
cagtggtaccttgagcacgttcccgcaggtcagccggtcaaggtccgggtctcttaccaa
aagttgctcaagacatttgttctcaacgagcttcacaagaagccacctcaagcacagaac
aaacagaatctcatgcggacgttgaagagcaccaagttcttccagcagaccaagctcgat
tgggtagaggcgggtctgcaagtttgccgacaaggttacaacatgctgaacttgctcatc
caccggaagaatctgacctacctccatcttgactacaacttcaacttgaagcctgtcaag
acactgaccaccaaggagcgtaagaagtcgcgtttcggaaacgctttccatcttatgcgc
gagatccttaggttaacgaagctcattgtcgacgcccaggtccaatatcgcctaggcaac
atcgacgccttccagctcgctgatggtattctttacgcgttcaaccacgtcggtcaattg
acgggtatgtaccgatacaagtacaagctcatgcaccaaatccgttcgtgtaaggatctg
aagcatttgatctactatcggttcaactcgggtcccgtcggtaagggccctggatgtggc
ttctgggcccctgcctggagggtttggctgttcttcatgcgcggtatcattcctctgctc
gagcggtggttgggtaacctgctttctcgtcagttcgagggtcgacatagcaagggcgtt
gccaagacagtcaccaaacagcgagtagaatcacactttgacctggaactacgcgctgca
gtcatgagcgacctcatggatatgatgcccgagggtatcaagcagaacaaagttaacact
gttcttcagcatttgtcagaagcatggcgctgctggaagagtaacattccctggaaggta
ccgggcttaccagcacccatcgagaacatcattctgcgctatgtcaagagcaaggctgat
tggtggatctcggtcgcacactacaaccgtgagcgcattcgacgaggtgctaccgtggac
aagactgtagctaagaagaaccttggacgattgactcgtctgtggctcaaggcagaacag
gagcgtcagcacaactacatgaaggacggtccttatgtgtcctccgaggaagctgtagcg
atctacaccaccatggtccactggttggaagccaggaagttccagccgattcccttccct
agtgtttcttacaagcacgacaccaagattttgattcttgccctggagcgtctgcgagag
gcttactctgtcaagggtcgtctcaaccagagccagcgtgaagaactagcactcattgag
caagcttatgattcccctggtacaactctggctcgtatcaagcgcttcctactcacccag
cgtgcgttcaaagaagttggcatagatatgaacgacaactacagcaacatcaaccctgtc
tacgacatcgaaccgatggagaagatcactgatgcgtacctcgatcaatatctttggtac
caagctgatcaacgacatttgttcccggcatggatcaagccttctgattccgaggtaccg
ccactcttgacgtacaaatgggcccaaggtatcaacaacctggacaaggtttgggagtca
caagacggcgagtgcaacgtcttgatcgagacccaactgtccaaggtctacgagaagatc
gacttgactatgctgaaccgtctgttgcgactcatcatggatcacaacttggccgactac
attacagcaaagaacaacgtccagctgaactacaaggatatgaaccacgtcaatgcttac
ggcatgatccgtggtttgcaattctccggcttcgtattccagttctacggcctcgttcta
gatatccttctcctgggcttgcagcgtgcgaacgatatcgccggtgcccccgagagcccc
aacgatttcctccagttcaaggacaaggagacagaggtccgccacccgattcgcttgtat
acgaggtacattgaccgcatttgggtgttcttcagattcactgctgaggagtcgcgcgac
ttgatccagcgcttcctaactgagaatcccgatcccaatttcgagaacgtcattggctac
aagaacaagaagtgctggccacgtgactctaggatgcgactgatgcgccacgacgtcaac
ctcggccgcgcagtcttctgggatctcaagaatcgtctacctcgctcggtgacgacgatt
gagtgggaagatacctttgctagtgtttacagtcgggataaccctaatctgctcttctcc
atgaacgggttcgaagtacgcatcttgccaaagattcggaacaccactggtgaatttcct
accaaagacagtgtatggtcactagtcgacaattccaccaaggagcgcactgcagatgct
ttcttgcaggtcaccgaggaggacatccagaaattcaacaatcgcattcgacagatcctg
atgtcgtctgggtctactactttcacgaagattgccaacaagtggaacacgacactcatc
gccctgttcacgtactaccgtgaggcggctgtgtcgacggtcaacctgcttgatacgatt
gtcaagtgcgagacgaaaatccagacgcgtgtgaagattggactaaactccaagatgcct
tcccgattcccgccagctgtattctacactcccaaggagcttggtggtttgggcatgatt
tccggatctcacattctcattcccgcgagtgacaagcaatggcacaagcaaaccgacaca
ggcatcacacacttccgcgccggcatgtcgcacgacgaagagacactcattcccaacatt
ttccgttacatcatcccgtgggagtccgaatttgtcgactctcagcgtgtgtggatggaa
tattcgcagaaacgccaagaggctcaacagcaaaatcggcgattaaccctcgaagatctt
gaagacagctgggatagaggactccctcgtattaacactctcttccagaaagaccgcagt
actctcagttttgacaagggttttcgcgcacggaccgaattcaaaatttaccaacacatg
aaaagcaaccccttttggtggaccagccaacgacacgacggtaaactgtgggcactccaa
gactacagaacggatgtaattcaggcgcttggtggagttgaaaccattctccatcacaca
ttattccaagcgacggcattcccgtcatgggaaggcctgttttgggaaaaagcttgtttg
cagaacggcactaagctccttcggtacgacgctactgaagtagcggtggaggaggtaaag
gacggtgacctattattgggtccagatggaggacctcgagttgtcagcaacgtggtgagt
ggcactgaccacctttaccgcatcaagatcggcggacgtaaagaggatctggtcgtcacc
tccaaccacatcttggtcctgcatcgtgagaaaggtgctgggaatgtatacgcggagccg
tcgactgaagatcaccactgtcgattttctgcacagctagacgatcttcctgacccgagc
tctgatcccgctgctgctgaccgccccaacaatttggtcaaagctcgaacaaacttcatt
tcggcattcaagagcgcgcttgcttggctgctgaaggccgagcgtggaaagaagggagca
gacactgtccgtaacacgctcaacggtactaccggtatcaccagtcgtcaggaatcctac
attgtgaacattccagtaggtaaaggtagcagggctgagtacgccacctttgcctggggt
aatccggaccgcacgaacatccaaggacatgccaaccaccctccaaccttcttcgcaacc
aaggacctcgctttcgccgcagctgttgcaaagagtagagagattcatgcgcgcgatggc
gtcactcttgcaaatctacgtcagcgattcgaagataagtctgctgatggtaaaggtgga
gagatccgcctcgacgctggcttacccaacatgttcttgctctggaacaagaacggctcc
ggtttgaagatacgggtgtactgttcccgcaactacacgaagtacggtcgcagctattct
ttcccagctcttcccgacgacaacgcagccggcgttgaggactctgaagacgaggaggat
gacctgctcgacactgaactggacagcgtcccaatttcagcatccgaacgttacgataca
gtcgagatgaccgctcaggaattcgccagtgtcgatccaaccatacagtcgaaatacagg
ttgttcagatgtcctggattcgacctccccgaatcggacgtaccggttcatccttacttc
ctagggctttggcttggtgatggctctcggacctccactaccatctactcaaaccatgag
cgtgaagttcgcgaatttttgtctaattacgctgctgagttggaccttcactttgtctgg
catgggggtctaaactacgctacagtaggccgaacacgccttgcggatcgacccttgcca
acggtgaaagaaggcaaagctcctgcacgaccagcggttcgccatgcgcgccagactatc
attaaacaacgcctcgcgggtggttggacgtttcaagagaatcgaggacctcgtgaactt
aggctttggatacgtcctggaggtttgatcgagaaggatggtcagaaacgcgggcgcagt
gagagcatcccactgtcaccagaaccccatcagcgtcctcgtctagtcacctcgtcttcg
tcacatccccagcccgcatcatcaataggttggcatgaagcagccagtctacgtgccgat
atttcggcattggcgaattcgatacccgtggaaccgctgtctgagatcctatctgatcct
gagcttatgagcatggctggtcccgctaatgtgcctgacgagacaacgcagtccgcgttt
gaagcagatgaggaagacgatctaaacgagtacctcgatttgatcgaagctgagagtgct
gacgagatgagcgatgacgaggatctcagcagcgacgacgttcatattatcaaccacgac
actggaggccgtccatcacactacgagcgccaacgtgtcacacgcctgggggctggtcgc
agggtacacggtgatctacttcctgaggagcaagatgaactcgtcaacgagattgttgag
cacgacgaaaacgccactgccgaaaacagcactggagttaacaagctcctcgtcgcactt
cgcaaacttggagtgatgccgccaccaggtgagactggtcatgaggtagatcggaaacac
atccccactgcatacatgaagaactccagggctgttcggcttgctgtgcttgctggtttg
ttagatagtgatggctggtatgtgtacccagagaacatgttcgggtttgctcagagtgca
ctctggcacaagacgctcttctggaatactgtagcactggcaagatctctgggcttcagt
gtctggactaccgaacgcgacatgtggaaccctaaccgaacgaagaaaacacctcacttt
ttcgctcagatttccggaaatctttccgaagttccttgtcttctgacccgcaagaaggca
tgcgaacgctacattcctcagatgcatagtttcgtgatcaaggacatcactctcgaatcc
tcgcctactggctggtctggcttcaaggttgaccaggatcaactatatctccgtcacgac
tacattgtacttcacaatagcggcttcgaagagtcgatgaaattcaagaagctcacgaac
gcccaacgctccggtcttaaccagatcccgaaccgacgattcactttatggtggtccccg
acgatcaatcgagccaatgtatacgtcgggttccaggttcagcttgacctaactggtata
tttttacacgggaagatccccacgctcaaaatttcgctcatccagatattccgagcccat
ctgtggcagaagatccacgagtcagtcgtcatggacctgtgtcaagtgtttgaccaagag
cttgaaccacttggaattgagacggttcagaaagagactattcatccgcgaaagtcctac
aagatgaacagctcctgtgccgacatcctgctttttgccagccataaatggagcgtatca
ccaccatccatgctgcacgacaccaaggataccatgagcgcgacgactacgaacaagttc
tggattgatgtacaacttcggtatggggacttcgactcacacaacatcgagcgatatgta
cgcgcaaagtacctcgactacacacaggatagcatgagcatctacccatcggctaccgga
ctcatgatcgccatcgatctggcctacaatctgtactcggcatatgggcagtactttcct
gggctgaagcaactgatccagcaggctatggcgaagatcatgaaagccaaccccgccctt
ttcgtcctccgtgagcgcattcggaagggtctgcagctgtatgcatcggagagttcgcag
gagtttttgaattcccaaaactactcggagctgttcagcaatcagatccagctgttcatt
gatgacaccaacgtttaccgcgtcacaatccacaagactttcgagggtaacctaacgacc
aagcctattaacggcgccatcttcatcttcaatcctcgcactggacagctgttcttgaag
attatccatacgagtgtctgggccggtcagaagcgtctgggtcaactagccaaatggaaa
acggccgaagaagttgcagctctcattcgatctctgcctgtggaagagcaaccgaagcaa
cttatcgtcactcgcaaaggtctgctcgacccgcttgaggtgcacttgctagacttcccc
aacatctcgatccgtgcgtctgagctacaacttccattccaggctgctatgaaggttgag
aagcttggtgacatgattcttcgagcaactgggcctcagatggtgcttttcaacctgtac
gacgaatggctaaagaccatctcctcatacaccgcattctcgaggttgattcttatactt
cgtgccctgcatgtcaaccaggacaagaccaagctgttgttgcgcccagacaagactgtc
atcacccaagagcatcacatctggccctcgctagcggatgaagattgggtcaaggtcgaa
gtagagctccgagatctcatcctgctcgactatggcaaaaagaataacgtcaatacctcg
tcgcttacatcgagcgaagtccgtgacatcatcctgggtatggagatctcggcgccttcc
atgcaacgtcaacaggcggccgagatagacaagcagcaggaagaacagcaacagttgact
gctgtcaccacgaagactcagaacgttcatggagaagagatggtcgttacgacaacatcg
cagtacgaacaagcatcttttgcctccaaaactgaatggcggacaagggctgttgccaca
tcgaaccttcgcactcgcgccaacaacatctacatcaactctgaggatgttaaggaggaa
gatcacttcacctacgtcatgccaaagaacgtgttgaagcggttcatcacaatcgccgat
ctacgcgtacaagttgctgggtatctctatggcaagtcgcccccggacaacaaccaagtc
aaggagatcagtactattgtgatgatccctcaagtcggcaacacccgtgatgtccagctt
cccaaggagctgcctaagcacgagtatctggaggaccttgagccgttaggcatcatccac
accgtcagtggtaacgagccaccgtacatgcaggcaagcgacgtcactcaacacgctcgt
ctcatgaaccgacacgctagctgggataagaagaccgtttccatgactgtctcttttaca
cccggatcagtttcattggcagcgtgggctctcacgcccaacggctacaagtggggcgtt
gagaacaaggacacgatgtccgacaacccaactggcttcagtactagctttggagagaag
tgccagcttcttctgtcagacaagatccgaggttatttccttgttccggacaacggtatc
tggaactacagcttcatgggtagtgcctttggcacggtagagaagaagccggtccatgtg
cgtctcgatacgcctgtccgcttctacgatgcagttcataggccactgcatttccataac
tttgccgagttggaagacgtttgggttgaccgcgagaaccaaatgtag
DBGET
integrated database retrieval system
