Pyrenophora tritici-repentis: 6349010
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Entry
6349010 CDS
T10215
Symbol
PtrM4_081290
Name
(RefSeq) RRM-5 multi-domain protein
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6349010 (PtrM4_081290)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6349010 (PtrM4_081290)
Spliceosome [BR:
ptrr03041
]
Complex A
U2 snRNP components
U2 related factors
6349010 (PtrM4_081290)
Complex B
6349010 (PtrM4_081290)
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GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
Torus
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
6349010
NCBI-ProteinID:
XP_001941033
UniProt:
B2WL42
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All DBs
Position
3:2012102..2012832
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AA seq
214 aa
AA seq
DB search
MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPK
NKMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKAC
DALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAELDRELDM
CTRKWLKERGRDARSMSRSPTPQPAAGGAAKSRF
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaactacctcgcctccatcttcggtaccgagcaagacaaagtaaactgttccttc
tactacaagattggcgcgtgccgccacggcgaccgctgctcgcgaaaacacgtcaagccg
tcgtactcgcagacgattctgctaccgaacctgtaccagaacccagcctacgaccccaag
aacaagatgaatgcgcagcagatgcagatgcactttgatgccttttacgaggacatttgg
tgcgaactctgccagtacggactagttgaggaattggttgtttgcgacaacaacaatgac
catctcatcggcaacgtctacgtccgcttcaagtacgaagaagatgcgcaaaaagcctgc
gacgcgcttaactcgcgctggtacgccggtcgccccatctactgcgaactatcccccgtc
acagacttccgcgaggcctgctgtcgccttaatagcggcgagggctgtgtccgcggcggc
ttctgcaactttatccatcgcaaggaaccctccgctgaactcgatcgcgaactcgacatg
tgcactcgcaagtggctcaaggagagaggtcgggatgccaggagcatgtccaggagtcca
acgccccaacctgctgctgggggcgcggccaagagcaggttttag
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