KEGG   Pyrenophora tritici-repentis: 6349075
Entry
6349075           CDS       T10215                                 
Symbol
PtrM4_082090
Name
(RefSeq) RNA-binding protein (RRM domain)
  KO
K12876  RNA-binding protein 8A
Organism
ptrr  Pyrenophora tritici-repentis
Pathway
ptrr03013  Nucleocytoplasmic transport
ptrr03015  mRNA surveillance pathway
ptrr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptrr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6349075 (PtrM4_082090)
  09122 Translation
   03013 Nucleocytoplasmic transport
    6349075 (PtrM4_082090)
   03015 mRNA surveillance pathway
    6349075 (PtrM4_082090)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptrr03019]
    6349075 (PtrM4_082090)
   03041 Spliceosome [BR:ptrr03041]
    6349075 (PtrM4_082090)
Messenger RNA biogenesis [BR:ptrr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     6349075 (PtrM4_082090)
Spliceosome [BR:ptrr03041]
 Complex C
  Other components
   EJC/TREX
    6349075 (PtrM4_082090)
SSDB
Motif
Pfam: RRM_1 RRM_3
Other DBs
NCBI-GeneID: 6349075
NCBI-ProteinID: XP_001941094
UniProt: B2WLA3
LinkDB
Position
3:<2209617..>2210125
AA seq 153 aa
MADIEMDIDQPEADPKAGDARTEAGATAVRSIEGWIIIVANVHEEATEEDLHDMFGEFGT
IRNLHMNLDRRTGYVKGYVLIEYATLDEAKAAIKGANGKELLEQTVAVDFAFVRPPPTTK
GRSRDHDRRQSGRGAGRARSRSPGRGSEGVEDE
NT seq 462 nt   +upstreamnt  +downstreamnt
atggccgatatcgaaatggacattgaccaacccgaagctgaccccaaggccggcgacgcg
cgcaccgaggccggcgcaacagctgtgcgctccattgaaggctggatcatcattgtcgca
aacgtacacgaagaagctacagaagaggatctgcatgacatgtttggcgagtttggtact
attaggaatctgcacatgaacttggacaggagaactggttacgtcaagggctatgttctc
atcgaatacgctacgctggacgaagcaaaggctgccatcaagggcgccaatggcaaggaa
ctccttgagcaaactgtcgctgttgacttcgcattcgtacgaccgcccccaacgaccaag
ggacgctcgcgcgaccacgacaggcgacagagtggccgaggcgctggcagagctaggagc
aggagtcccggccgaggcagcgagggtgtcgaagacgaatag

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