Pyrenophora tritici-repentis: 6349177
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Entry
6349177 CDS
T10215
Symbol
PtrM4_131450
Name
(RefSeq) WD40 repeat protein
KO
K10752
histone-binding protein RBBP4
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03082
ATP-dependent chromatin remodeling
ptrr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6349177 (PtrM4_131450)
03083 Polycomb repressive complex
6349177 (PtrM4_131450)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptrr03036
]
6349177 (PtrM4_131450)
Chromosome and associated proteins [BR:
ptrr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
6349177 (PtrM4_131450)
Histone modification proteins
HAT complexes
HATB complex
6349177 (PtrM4_131450)
HDAC complexes
Sin3A-HDAC complex
6349177 (PtrM4_131450)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
6349177 (PtrM4_131450)
PRC2.2
6349177 (PtrM4_131450)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
6349177 (PtrM4_131450)
Heterochromatin formation proteins
Other heterochromatin formation proteins
6349177 (PtrM4_131450)
Chromatin remodeling factors
NuRD complex
6349177 (PtrM4_131450)
NuRF complex
6349177 (PtrM4_131450)
NuRF complex (fruit fly)
6349177 (PtrM4_131450)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NBCH_WD40
WD_LRWD1
Beta-prop_WDR75_1st
MIOS_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
6349177
NCBI-ProteinID:
XP_001941196
UniProt:
A0A2W1FGT0
B2WLK5
LinkDB
All DBs
Position
7:complement(1937393..1938950)
Genome browser
AA seq
433 aa
AA seq
DB search
MDETMSDALDSREMDDQEQVEQKIINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPVEGTNMSQHRIILGTHTSNQAQNYLQIAHCEIPDFRVPDLSELNEERGEIGGYGNAK
KPFDFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLVFDRTKHPLQPKDDTVKFEA
ELVGHSKEGFGLSWSPLKEGHLVTGNEDTTVKTWDIKSGFSKSNKTISPTATYNVHSATV
NDVQYHPIHSHLIGTASDDLTWQILDTRMETYKKALYRKEAHEDAVNCISFHPEFEATFA
TGSADKTVGIWDLRNFDKKLHSLQSHRADVIGLQWHPQDAAILASSSYDRRICLWDLSKI
GSEQSDEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWLMMGAAEDNQLQIFRPSRKLVE
PLKKTVNHGEVSD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaccatgagcgacgctctcgactcgcgcgagatggacgaccaagagcaggtc
gagcagaagattatcaacgaagagtacaagatatggaagaagaatagcgtttttctctat
gatatgctctacggacgcgcactcgagtggccaaccctcaccacacaatggctacccgac
aagaagcctgtagaaggcaccaacatgagccagcaccgcatcatcctcggcacccacacc
tcgaaccaggcgcagaattaccttcaaatcgcccactgcgagattcccgacttccgcgtt
cccgacttgtcagagctcaacgaggagcggggggagattggcggctatggcaatgcaaag
aagccttttgacttcaagattgtgcaaaagatcaaccaccccggcgaggtcaacaaggcg
cgataccaaccacagaaccccgacataatagcgtctctttgcgtagacggcaaggtgctc
gttttcgaccgcaccaagcacccactgcagcccaaggacgacaccgtcaagttcgaagcg
gagctcgtaggacacagcaaggagggctttggactaagctggagtcccttgaaggagggc
cacctggtgactggtaacgaggacacgacggtcaagacatgggacatcaagtccggcttc
tccaagagcaacaagaccatcagcccaacagcaacgtacaacgtccacagcgccaccgta
aacgacgtccaataccaccccatccacagccacctcatcggcaccgcatccgacgacctc
acctggcaaatcctcgacacgcgcatggagacgtacaaaaaggcattatacaggaaggaa
gctcacgaggacgctgtcaactgcatctccttccacccagaattcgaggcgacattcgca
acaggttccgcagacaaaaccgtcggcatctgggacctacgaaacttcgacaagaagcta
catagcctccaaagccaccgcgcagacgtcatcggtctccaatggcacccacaagacgcc
gccatcctcgccagctccagctacgaccgccgcatttgcctgtgggatctcagcaagata
gggtcagaacagtcggacgaggaggcagaagatggtcctcccgagctactcttcatgcac
ggcggcttcacaaaccgcatctgcgactttgactggaacaagaacgacccctggctcatg
atgggcgcggcagaagataaccaacttcaaatcttccgcccctcgcgtaaactcgtggag
ccgctcaagaagactgttaatcatggagaggtctcggattga
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