Pyrenophora tritici-repentis: 6349338
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Entry
6349338 CDS
T10215
Symbol
PtrM4_133250
Name
(RefSeq) SSL2, DNA or RNA helicase superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03022
Basal transcription factors
ptrr03420
Nucleotide excision repair
Brite
Enzymes [BR:
ptrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
6349338 (PtrM4_133250)
Transcription machinery [BR:
ptrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6349338 (PtrM4_133250)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6349338 (PtrM4_133250)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
6349338
NCBI-ProteinID:
XP_001941357
UniProt:
B2WM16
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Position
7:complement(2411147..2413558)
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AA seq
803 aa
AA seq
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MPPKRKAPTAADVAAEDDWDDNDEGPMSDQDTFDQLKEEFDVKAMTKRARAGRVRDAAAD
LFRKSDQWSAPLKPDHFNRPLWVNDAGGIILESFHPLFDEAQDFLINIAEPQSRVSKMHE
YQLTTHSLFAAVSVGHSKEEIIDKLDRYSKTALSAAIIQFVEKSTSAFGKAKIVLKKTLS
YIESEDPAILQKLLRDPIVAGCRADATDGLIKEAAPKIGQMAIPGTKLAAGANNMAQQPQ
PEAVQNPAPSDMVAALREDDDDDEVAQVHSFQIRSEEREKVVKRCRAIGLPLTEEYDFNN
DDTNPNLEIDLKPHAQIRYYQEKALGKMFSNSRARSGIIVLPCGAGKTLVGITAACGVKK
SVMVLCTSAMSVVQWRAEFIKWSNINPEDIAVFTADNKTRFPRQAGIIISTYSMISNARK
RSHDAEKVMQFIREREWGLLIADEVHVVPANIFKKVTYEIASHAKLGLTATLLREDDKID
DLNFLIGPKLYEANWQELSEQGHIAKVQCAEVWCQMTPEFYTEWLKPSSLQKRALLSIMN
PKKFQACQFLINYHESRGDKIIVFSDNVYALEKYSRKLGKAYIYGATPQQERLRILENFQ
HNDQINTIFLSKIGDTSLDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAF
FYSLVSKDTDEMYYSSKRQAFLVDQGYAFKVITRLEGLDSFPQLAFATPQERRELLTDVV
LAKEEDAKAERIEDDAFGTKYASQKGNRKKNGVRRAAGTLSEFSGGQTMAYMEVNKSRNK
DLKGTKGVQNAFLRKLGRSGPKK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctaagcgcaaagcgccgacagcagcagacgtagcggccgaggatgactgggac
gataatgatgagggtcccatgagcgaccaggacacgttcgaccagctcaaggaagagttt
gacgtcaaggccatgacaaagcgagcgcgcgctgggagagtcagagacgccgctgcagac
ctgttcagaaagtcggaccagtggagtgcgccgctcaagcctgaccacttcaaccgtccg
ctctgggtcaacgatgcgggtggcatcatcctcgagtccttccaccccctcttcgatgag
gcacaggactttttgatcaacatcgccgagccgcagtcgcgtgtctccaagatgcacgag
taccaacttaccacccacagtctcttcgccgccgttagtgtcggtcattccaaggaggag
attatcgacaaactggaccgctactccaagacggcattatctgctgccatcatacagttt
gtcgaaaagtctacgtccgcttttggcaaagctaagatcgtcttgaaaaagacgctatca
tacattgagagtgaggatccggccatactccagaaacttctccgcgatcccatcgtcgca
ggctgcagagcagacgccaccgatggtctcatcaaggaggctgcccctaagattggtcag
atggccatccccggtaccaagctagctgctggcgccaacaacatggctcagcagccacag
ccagaagcagtccagaaccctgcacccagtgacatggttgccgcccttagggaagacgac
gatgacgacgaagtagcacaggttcattcctttcagatcaggagtgaggagcgcgaaaag
gtcgtcaagcgctgtcgagccatcggtctaccgcttaccgaggagtatgatttcaacaat
gacgacacaaatccaaacttagaaatcgacctcaagccccatgcgcagataagatactac
caggaaaaggcacttggtaagatgttttcaaattcccgagcacgttcaggcatcatcgtg
ttgccctgtggtgcaggtaagacattggttggcattacagccgcctgcggtgtcaagaag
tctgtcatggtcctgtgcaccagcgccatgtcggtcgttcagtggcgagccgaattcatc
aagtggtccaatatcaaccctgaggatattgccgttttcactgcagataacaaaaccaga
ttccctcgccaggctggcataattatcagcacctactctatgatcagtaacgcgaggaag
cgttcgcacgatgctgagaaagtgatgcaattcatccgagaacgagaatggggactgctg
atcgccgacgaggtgcatgttgtaccggcaaacatcttcaaaaaagtcacctacgaaatc
gcttcgcacgcaaaactcggtctaaccgctaccctgctgcgagaagacgacaagattgac
gatctcaatttcttgatcgggcccaagctgtacgaagccaactggcaggaactgtccgaa
cagggccatattgccaaagtccagtgtgctgaggtctggtgccagatgactcccgagttt
tataccgaatggctgaagccttcttcactacagaagcgcgcattgctgtcaattatgaac
ccaaagaagtttcaagcctgtcagttcttgatcaattaccacgaatcaagaggcgacaag
atcatcgtcttctccgacaatgtctacgcgctggaaaaatactcgcgtaaacttggcaag
gcgtacatttacggagcgacccctcaacaagaacgtctgagaattctggagaacttccaa
cacaatgaccaaatcaacactatcttcctgtccaagattggagacaccagtttggatctt
cccgaggcgacttgtctcattcaaatctcatcacattacggttcgcgccgtcaagaagcc
cagcgcctaggcagaatcctgcgggccaagaggaggaacgacgaaggcttcaatgccttt
ttctactccctcgtctccaaagatacagatgagatgtactactcctccaagcgccaagcc
tttctcgtcgaccaaggctacgccttcaaagtcatcacccgtctcgaaggcttagattca
ttcccccagctggcgtttgcaacaccacaggaacgaagagagctgctcacagatgtcgtg
cttgccaaagaagaagatgcaaaggcagagcggatcgaagacgacgcgtttggcacaaag
tacgcttcgcaaaagggcaacaggaagaagaatggtgtgcggagggcggctggtacattg
tcggagttctcgggtggccaaactatggcgtatatggaggtcaataagagtaggaataag
gatctcaagggaactaagggagtgcagaatgctttcctgaggaagcttggcaggtcgggg
ccgaagaagtaa
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