Pyrenophora tritici-repentis: 6349352
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Entry
6349352 CDS
T10215
Symbol
PtrM4_133410
Name
(RefSeq) Cdc48-dependent protein degradation adaptor protein (Shp1)
KO
K14012
UBX domain-containing protein 1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
6349352 (PtrM4_133410)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6349352 (PtrM4_133410)
Membrane trafficking [BR:
ptrr04131
]
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SNARE associated proteins
Others
6349352 (PtrM4_133410)
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Ortholog
Paralog
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Motif
Pfam:
SEP
UBX
UBA_4
UBA_8
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
6349352
NCBI-ProteinID:
XP_065961119
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Position
7:complement(<2453948..>2455354)
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AA seq
415 aa
AA seq
DB search
MSEAAPNRDAQIAELANLTGLDAATAERYLNASNGDLGLAATLFFDESTEQQDATSEPDV
DMADSDPTPDPTQNPPPPTSAGGGRTLGGAYVPPSQAPAAASSSSRPAAGRGQPTQRGVA
GARTLRDLQSENQDFFAGGEKSGLAVQNPNQSNPRDQINSILKRARQNAPRPGGDEEPPT
SSFFRGAGTTLGGDDAPSRTIPDPNANIPAPPPRAHRELHLWRDGFSVDDGDLFRYDDPA
NARTLEMINTGHAPLHILNVEHGQEVDVEVHAHKDEDYVKPKKKYVPFSGNGNRLGSPTP
GASSSASTMPQPASGSTAASTSGGSAQPTVDVDSSTPTLTLQVRLGDGTRLSSRFNTTHT
IGDVYDFVDRARPDSQGRQWALMTTFPSKELTDKSQVLGDIAEFKRGGVVVQKWK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagctgcacccaacagagacgcgcagattgcagagctcgctaatctcactggc
cttgacgcggcaacggccgaacgctacctaaacgcatccaacggtgatctcggtctcgct
gcgactctctttttcgacgagtctactgaacaacaagacgctacttctgagcccgacgtc
gacatggccgattccgatccaacacccgatcccacgcagaaccctccgccaccaacaagc
gctggcggcggacgcactcttggtggcgcgtacgttcctccttcacaggcaccagcagca
gcatcatcatcatctcggcctgccgctggccgtggacagcccacacaacgaggtgtggca
ggtgcgaggacgctgagggacttgcaatcagagaaccaggacttctttgccggtggcgag
aagtcgggcctagcagtccaaaaccccaaccagtcgaatcctcgcgatcagatcaacagc
atcctaaagcgggcacggcagaatgctccccgaccgggtggtgacgaagagccgccaacc
agctcattcttccgtggtgctggtactacgctgggcggtgacgatgctccctcacgtacg
atcccggaccccaacgccaatatccccgcaccgcccccgcgcgctcatcgcgaactccat
ctctggcgcgacggcttctcggtcgatgacggcgacttgttccgctacgacgacccggct
aatgcgcgcacgcttgagatgataaacacgggccatgctccgctacacattctaaacgtt
gagcacgggcaggaagtggacgtcgaggtacatgcgcacaaggatgaggactatgtgaag
ccaaagaagaagtacgttcctttctcgggaaacggaaacagacttggtagccctacccct
ggtgcaagttcatcggctagtaccatgccgcagccggcctcagggagcacggcggcctcg
acctcgggaggctctgcgcaacctacagttgacgtggattcgtcgacgcctacgcttacg
ctacaagttcgcctcggtgatggcacacggttgtcgtcccggttcaacaccacacacacc
atcggcgatgtctacgactttgtggacagggctagaccggatagccagggtcgccagtgg
gcgctgatgacgacattccctagcaaggagttgactgacaagtcgcaggtgctaggtgac
attgcagaattcaagcgcggcggtgttgtggtgcagaagtggaagtag
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