Pyrenophora tritici-repentis: 6349356
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Entry
6349356 CDS
T10215
Symbol
PtrM4_133450
Name
(RefSeq) endonuclease protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
6349356 (PtrM4_133450)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6349356 (PtrM4_133450)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
6349356 (PtrM4_133450)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
PHD
zf-HC5HC2H
T5orf172
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
6349356
NCBI-ProteinID:
XP_001941375
UniProt:
B2WM34
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All DBs
Position
7:2465637..2466731
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AA seq
364 aa
AA seq
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MTDGLKIDSRPLPAFYCCYLLRSKNRKAFYIGSTPNPARRLGQHNGSSKGGAKRTSMQGK
RPWEMTCIVTGFPSRFAALQFEWAWQNTHATRHIERDVREARKDELEKGRKNASPVKRSR
PPMSLEARLKNLHHLLGVGSFSRWPLHVRFFAPDVFSQWEKHISKMNTSLRKSITIRLTP
AELPKLAPDVSSEMRTHFIPEVIRAIPVAYEDIKPYVEKSMSTLRDGKTRDCGVCKKDVN
VDRSLVLICPNETCCSVSHMSCLSQRFLAEEANKEAFIPIEGTCPSCHSPIKWSDMIKEL
SLRMRGEDELKTLFKTKRKKKQVDTTEDDTDEYPDIDDLNADLDEDLDETWMENVNEEDD
KPRS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgggctcaagatagacagcaggcccctccccgccttctactgctgctatctg
cttcgctcaaagaaccgcaaggccttttacattgggagcacacccaacccggcccgccgt
cttggtcaacacaatgggtcgagcaagggtggtgcaaagcgcacttcgatgcaggggaag
cggccttgggagatgacctgcatcgtgaccggcttcccctccagattcgccgcactgcaa
ttcgaatgggcgtggcaaaacacgcacgcgacacgccacatcgaacgagatgtgcgcgag
gcgagaaaggacgagttggaaaagggcaggaagaatgcatcgcccgtcaagagatcaaga
ccaccaatgtcactggaagcacgactcaaaaacttgcatcacctcctgggcgtcggtagt
tttagcaggtggccgctacacgttcgattcttcgcgccagatgtgttttcgcagtgggag
aaacatatatccaaaatgaacacgagcctacggaagagcattaccatccggctgactccg
gccgaactccccaagttggcccctgatgtatcgagcgaaatgcgaacacacttcatacca
gaagtcatacgagcaatccctgttgcttatgaagacatcaaaccgtatgttgagaagtca
atgagcaccctgagagacgggaagacgcgggattgtggtgtctgtaagaaggatgtgaat
gttgatagatcgctcgtgctcatttgtcccaacgagacatgctgctctgtgtcacacatg
tcctgcctgtcgcagagattccttgcagaagaggccaacaaagaggcctttattcccata
gaaggaacatgtccaagctgccacagccccatcaaatggtccgacatgatcaaagagctc
agtctacgaatgcgcggcgaggacgaactcaaaactctattcaaaacgaagcgtaaaaag
aagcaagtcgacaccacagaagacgacaccgacgaatatcccgacattgacgacctcaac
gccgacctcgacgaagatctcgacgaaacctggatggaaaacgtaaacgaagaagacgac
aaaccccgatcctaa
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