Pyrenophora tritici-repentis: 6349426
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Entry
6349426 CDS
T10215
Symbol
PtrM4_072920
Name
(RefSeq) EAP30 multi-domain protein
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
6349426 (PtrM4_072920)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6349426 (PtrM4_072920)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrr04147
]
6349426 (PtrM4_072920)
Membrane trafficking [BR:
ptrr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
6349426 (PtrM4_072920)
Exosome [BR:
ptrr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
6349426 (PtrM4_072920)
Exosomal proteins of colorectal cancer cells
6349426 (PtrM4_072920)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Vps36-NZF-N
zf-Sec23_Sec24
Zn_ribbon_RanBP
DZR
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
6349426
NCBI-ProteinID:
XP_065964634
LinkDB
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Position
2:complement(4847151..4849035)
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AA seq
595 aa
AA seq
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MFLHQLDLTTALRPSLLPEETLLFVQDQVGLYEGKFKIPEYQNGQSYLTSHRVCYVDHNE
PRKNSVAIFLKDVEKADFYAGFLKSSPKITLYPKPLKQLSRGSSVPSNPQVASVSSSTPP
RHSSPAPPPPASATWVCPICSFSNPVPSNFDPALASRTPIPPCLACGIKPPTVHVVKAAI
AAISNRPAPGPPPKDVKNGAPVAVNNGETSSCPRCTYQNHPSLLNCEICGASLTTAADRR
LDILQEPSRSQSPGPTLASPLQSESVECIKMSFRAGGGPIFYERLKNALIQRKWLLQSAP
PIPKPRPASGSFQDGYAPNPDGSSAEEERPRVVGIAGLERRGLEQRQNNEAMIGGAFEDL
EALMTSAKEIIALAEQFASQANLGTSDSSEANALASQSASALGLVTTKDMLGTGSGSESL
YVSELSRNLAEWLTDDTRGILRKEGGIMTLVDLWAVFNRARGGVELVSPSDFEKAARMWD
TLKLPVRLRQFKSGLLVVQGRDRTDEKTIASLLAWLKILHQEPPANEVTWDWQMYGRGVT
AQETAERFGWSVGVATEELEMAEESGALCREQGIDGFRFWENWLINMPETVGASM
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgcatcagctcgacctcactaccgcactgcgcccgtcgctcctgccggaggag
acgctgctttttgtccaagatcaagtcgggctctatgagggcaaattcaagatacccgag
tatcaaaatggccagtcctacctgacctcgcaccgcgtctgctatgtagaccacaacgag
ccacgtaagaactcggttgctatatttctgaaagatgtcgagaaagccgacttttatgcc
gggttcctcaagtcctcacccaagatcaccctctacccgaagcctttgaagcagttgtcg
cgtggtagctcggtgccctccaatccacaggtcgcttccgtctcgtcttccaccccgccg
cgacatagtagccccgcgcccccgcctccagcaagcgcaacatgggtgtgtccgatatgt
tcattttcgaacccggtgccgtccaacttcgatcctgccttggcatcgcgtacacccata
ccaccatgtctggcatgcggaatcaagccgccaacggtgcatgtagtcaaggcggccata
gcagccatttcgaaccgacccgctcctggtccgccgccgaaagatgtgaagaatggagca
cccgtcgctgtaaacaatggtgaaacgtcgtcgtgtccaaggtgcacctaccagaaccat
ccctctctgctcaactgtgagatatgcggcgcatctttgacaacagctgccgacaggcgt
ctggatatacttcaagagcctagcaggtcccagtcaccaggtcctactcttgcatcacct
ttgcagtctgagtctgtcgaatgcatcaagatgtcgtttcgtgcgggtggagggcccatc
ttctacgaacgtctgaagaatgccctgatccaacgcaaatggctgctgcaaagtgcccca
ccgattccgaaaccgcggccagcctctgggagttttcaggacggctacgccccaaatccc
gatggttcgtctgccgaagaggagcggcctcgagttgtcggtattgcaggattggagcgg
cgcggtctggagcagagacagaataatgaggctatgataggcggtgcatttgaagatctc
gaagcgctgatgacttcagcaaaggagattattgctctagctgaacagtttgcgtcgcag
gccaacctaggcactagtgatagttccgaagccaatgcgttggcatcccagtctgcttct
gcacttggtctggttaccaccaaggatatgctgggcactggatcaggttcagaatcctta
tatgtatcagagctttcaaggaatttggccgagtggttgacagacgatactcgggggata
ctacgaaaagagggtggcatcatgacacttgtagacttgtgggccgtctttaaccgcgca
agagggggcgttgagcttgtcagcccttcagattttgaaaaggcagctcgaatgtgggac
acgctcaaactcccagtacgtttacggcagttcaagagtggccttttagtcgtccaaggt
cgcgaccgcacggatgagaagaccatcgccagtctcctggcctggttgaagatcctgcat
caagagccgccagccaacgaagttacatgggactggcaaatgtacggacgaggcgtcacc
gctcaagagacggctgaaagatttggttggagcgttggagtcgcaactgaagagctggag
atggccgaagaatctggcgcactgtgtcgtgagcagggcatcgacggcttcagattctgg
gaaaactggcttatcaacatgccagagactgtgggagcgagcatgtag
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