Pyrenophora tritici-repentis: 6349474
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Entry
6349474 CDS
T10215
Symbol
PtrM4_072470
Name
(RefSeq) WD40 repeat protein
KO
K14299
nucleoporin SEH1
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6349474 (PtrM4_072470)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6349474 (PtrM4_072470)
04131 Membrane trafficking [BR:
ptrr04131
]
6349474 (PtrM4_072470)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6349474 (PtrM4_072470)
Membrane trafficking [BR:
ptrr04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
6349474 (PtrM4_072470)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML
SHKBP1_KCTD3_C
DUF6491
Motif
Other DBs
NCBI-GeneID:
6349474
NCBI-ProteinID:
XP_001941492
LinkDB
All DBs
Position
2:<4730062..>4731729
Genome browser
AA seq
508 aa
AA seq
DB search
MANNSQPGRSAKPDPFLAELNAVNNHLATPGFLQRLTPSQLPSAAVSDSSSLSPTREEAR
SRRPRPSHLNLAVAFESENEIEHVDLISPLIQEPCADGNPGSVEQHIADHLEVAFVCAHR
AYATMAAERSFSTFAHGHQDLVLAVDFNYFGNRMVTASSDHRLKVWDKKDDAWTLVESWK
AHDAEIVDVKWNGPFMGEVVGSIGEDGRCKLWQEDVTEVAMSGNRFKLLYNLASLTNAPF
MSLDFKNIMQETWLALITRDGYLTVYEPQDQTNLHEWTILAERWVSENNPPERQEEVGFK
VVFHKEKLPCWTAITAGLDRKSLSLAVAAMKDVLVFRTDKAKRFFQVAKLEGARGIIRDL
AWANGSMRGYDILATASKDGAIRIYELHTKNDEKTQASGAASSSVIQAVPPRQVPRQNAP
SGIGAGLAGVSKAPDAPLEYGQHPGRIEQVPTLTDELTNHHGAVWRVTFSQMGDLLVSTG
DDASIRTWKKAADGHWLEYAQIETAQED
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaactcgcagcccggccgctcagcgaagccagacccgttcctggcagagctg
aatgccgtgaacaatcacttggctacgccgggctttctccagcgtttgacgccgtcgcaa
ttgccctctgcagctgttagcgactcgtcgtcgctcagccccacccgagaggaagcacgg
tctcggcgtcctcgcccatcgcatctcaacctggccgtcgcctttgagagtgagaatgag
attgagcacgtcgacttgatctcgccgctgattcaggagccctgtgccgacggtaacccc
ggcagcgttgagcagcacattgccgaccacctcgaagtagcctttgtgtgcgcacaccgt
gcctacgccaccatggccgcagagcgcagcttctcgacgtttgcgcatggccaccaggac
ctcgtgctcgccgtcgacttcaactactttggcaaccgcatggtcacggcgagttcggat
catcgcctcaaggtctgggacaagaaggacgacgcatggaccctagtcgagagctggaag
gcacacgatgccgagattgtggatgtcaagtggaacggccccttcatgggcgaggttgtc
ggcagtattggcgaagacggccgctgcaagctctggcaagaggacgtgaccgaagtcgcc
atgtctggtaaccgcttcaagttgctttacaatcttgcatcacttaccaatgcccccttt
atgtctctggacttcaagaatatcatgcaggagacctggcttgcactcatcacccgtgac
ggctacctgactgtctatgagcctcaagatcagaccaaccttcatgagtggaccatcctg
gctgagcgttgggtgtctgagaacaaccctcccgagcgtcaagaagaggtaggcttcaag
gtcgtcttccacaaggagaagctgccatgctggaccgccatcacggctggcttggaccgc
aagtcactttcgctcgctgttgctgccatgaaggacgtcctagtcttccgcaccgacaag
gctaagcgcttcttccaagttgcgaagctcgagggtgcgcgcggtatcattcgggacttg
gcttgggcaaacggctccatgcgcggctatgatatcctggccacagctagcaaagatgga
gctattcgcatctacgaacttcacaccaagaacgacgagaagacccaagcatctggagca
gcctcatcttctgttatccaggccgttcctccgcgccaagttccccgacagaacgcgcca
tctggcataggagctggtctggctggtgtttccaaggcacccgacgcgccccttgagtac
ggccaacaccccggtcgtatcgagcaggtgcctacattgacagatgaacttaccaaccac
catggagcggtttggcgggtcacattctcacagatgggagatcttcttgtatcaaccgga
gacgatgctagcattcgtacctggaagaaggctgctgacggtcactggttggagtacgcc
cagattgagaccgctcaggaggactaa
DBGET
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