Pyrenophora tritici-repentis: 6349653
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Entry
6349653 CDS
T10215
Symbol
PtrM4_070570
Name
(RefSeq) nucleoporin Nup157-170
KO
K14312
nuclear pore complex protein Nup155
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6349653 (PtrM4_070570)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6349653 (PtrM4_070570)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6349653 (PtrM4_070570)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
DUF3958
Motif
Other DBs
NCBI-GeneID:
6349653
NCBI-ProteinID:
XP_001941670
LinkDB
All DBs
Position
2:complement(<4269110..>4273157)
Genome browser
AA seq
1298 aa
AA seq
DB search
MLDRDNRFPALEAYIGQGVTGEYEIPQSPAWMPFQKLRSYKLPEAVFEQVDHTQMSTSMG
LFAEINHAWVVVDNQVYLWDYTHPNPELVGFEEQPSNITCVKLVKPRAGVFVPSIEYLLV
VATVSDIFLIAIECQRGPEGVHGITMYRTGLSTSVRKINVTAIAGSAATGRIFFGDGHTE
DVYELNYQQEDKWFSSKCSKTNHVTPSIGLPSLPFYGPAKVDGIQDMVIDDTRKVLYTLS
TNGTIKVYYMRDSNILESALTRTRDQIETMCGHIVRSAAALSNMRVVSLTPITSTEADNM
SLMAITSTGCRLYLSTTSGGQWNSTNTSAPNSMQLRHIRFPPHQNQNTSQLSNSTQVQPY
QGSAAIAFDSTWLTQTKLATRYAPGAFFSFVLQSPNDPNHHMFASAPHSGLLAQRESSEP
PRYTETGMFTPLIGRVQDIGLVTAPFSARNEPLGFGNELSTQFDIPLSEYAIITSNGIET
VRRRRLVDIFASIVKVHGPDGAEADVRKLAKQYGLAETSATALAVACGQGSDVGPDSRIA
KVTDSEVIEFARKVFIEFGGKAHLTESATVEGLSVENVRASPRHDGIAMYVSRLVRSIWN
TPIIQEVAEPTGPVLTSTHGTAKLHEIQRCLAQLHEFLESNKSFIEGLAGPEALGRAASR
QEEVELQGENRALTSLLLMINNIVEGISFVLVLFEERLEDILALLPDPQLQTRVRQLTFQ
GLFSANEGREIARELVKAIVNRNITKGSNVESVAEALRRKCGSFCSSDDVVIFKAQESLK
KAADLGVNAERGRILLNDSMRLFEQVAKSLSYENLSETVNQYIQLEFYAGAIRLALKVAH
EWDRGNKALSWVRDNRDHNGDPNDARRQFYDKRAFCYTLVCKVIEAVDYAYNTQGPVPDG
VISAVTRRKHEAYEQINNSEDEVFQNYLYDWYMENGWSERLLEINSPFVVEYLKQSSETN
LAHADLLWRYYAHYNDYLSAADTQYQLAKSTLPLTLEKRIEYLSRAKANASTRMTGFADA
GVRNRQSRQELLRNISDHLDIANIQDDVLQRIRGDERLSGQRRDEVIAHLNGQIHSLDEL
YHDYADQAAYYDICLLIYHAADYRSVPDIRSTWTNLIDQTHRKALADGQSAPWEAVALKV
EDLGHRTNLNDNVFPVNIVLQLLLQYDLEFYVHDANAPNTQNLALNSNLTWPIDVFLKIN
APYENLVATLEALWYAQEQPFAGRNRKLLVKWIVYLVEHWSKASRRTGTLFGGPENAIGL
AEVMRIILGSEVLGRDMDDQSWIQRAREVSATVEEAAR
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgctggacagggacaatcggttcccagcactggaggcgtacataggacagggcgtcact
ggtgaatacgagataccgcaaagtccagcatggatgccctttcagaaattgcgctcctac
aagctcccagaggccgtgtttgagcaggtcgaccatacgcaaatgtcgacgagcatgggc
ctgttcgccgagatcaaccacgcctgggtggtcgtggacaaccaggtctacctttgggac
tacacgcacccgaaccccgagctagtcggtttcgaagagcagcccagtaatattacgtgc
gtgaagctggtcaagccgcgggccggtgtcttcgtcccaagcatcgaatacctcctcgtt
gtcgcgaccgtgtcagacattttcctcatcgccatcgaatgccaacgggggcctgagggt
gtgcatggcatcacaatgtaccggacggggctgtcgacgtcggttaggaagatcaacgtg
accgccattgccggctcggcagcaacagggcgcatcttctttggcgacggccatacagaa
gacgtatacgagctgaactaccagcaggaggacaagtggttctccagcaagtgcagcaag
acgaatcacgtcacgccatccattggcttaccctcactcccattctacgggcccgcgaaa
gtagatggcatacaggacatggttattgacgacacccggaaagttctctatacgctttcg
accaatggcactatcaaagtctactacatgcgagattccaacattctcgagagcgccctt
acccgcacacgagaccaaatcgagacaatgtgtggccatattgtacgctcagccgccgct
ctgagcaacatgcgagttgttagcctgacgcccatcacaagcacagaagcggacaatatg
tcgttgatggcaatcacctcgactggatgcagactatatctaagcacgacctctggtggc
caatggaactctaccaacacgagcgctccaaatagtatgcagttgcgtcacatccgattc
ccgccacaccaaaatcaaaatacctcgcagctcagcaactcgacacaggtacaaccttac
caaggcagtgcagcaatcgccttcgattcaacgtggctcacacaaaccaagctcgcaacc
agatacgcacccggtgctttcttttcctttgtactccagtcgcccaatgacccgaatcac
cacatgttcgcttcggctccgcattcgggactgctagcgcaacgggaaagctcggagcct
ccgcgctacactgagactggcatgtttacaccgctcataggcagagttcaagacattggc
ctagtcacagcccccttctccgcaagaaacgaacccctcggctttggaaacgagctctcc
acccaattcgacattccgctctccgaatacgcaatcattacatcaaacggcatcgaaacg
gttcgacggagacggctggttgacatctttgcctctattgtgaaagttcatggtccagac
ggtgctgaagctgatgttcgcaagctcgcaaagcagtacggtctagctgagacctctgct
accgccctagctgttgcctgtggtcaaggatcggatgttgggcccgactcgcgaattgcg
aaagtaaccgactcggaggttatcgaatttgctcgaaaggtctttatcgaatttggcgga
aaggcccatttgacggagagtgcaacagtagaaggtctgagtgtggaaaatgttcgcgca
tcaccacggcacgatggtattgctatgtacgtgtcacgcctcgttcgctcaatctggaat
actcccatcatccaggaggttgccgaacccaccggtcccgtcctcacatcgacacacggc
actgccaagttgcacgaaatacaacgctgtttggcccagctccacgagtttctagagtcc
aacaagtctttcattgagggattggccggcccagaagcattgggacgcgcggcgtcgcgg
caagaagaggttgagctccaaggcgagaaccgggcactcaccagtttgttgctcatgatc
aataacattgttgagggcatatcttttgttctcgtactcttcgaagagcgcttggaggat
atcctggcgctgctgccagatcctcagctacaaacgagggtccgtcagctcacatttcag
ggtctcttttccgccaatgagggtagggagattgccagggaattggtcaaggccattgtg
aaccgtaacatcaccaagggttccaatgtcgaatcagtcgccgaggccctgcggaggaag
tgtggcagcttctgcagttcagatgatgttgtcattttcaaggctcaggaaagcttgaag
aaagcagccgacctcggcgtaaatgccgaacgtgggcgtattctgctcaatgacagtatg
aggttatttgagcaggtagccaagagtttgagctatgaaaacctgtccgagactgtgaac
caatacattcagctcgagttctatgctggcgctatcagacttgccctcaaggttgcccat
gaatgggatcggggtaacaaggcgctttcttgggtgcgggacaaccgtgaccacaacggc
gatccaaacgatgcccggcgtcaattctacgacaagcgcgcattttgctacaccttagtc
tgcaaggtcatcgaggccgtcgactatgcttacaacacccaaggacctgtaccagatggt
gtcatctccgcagtcacccgtcgcaaacacgaagcgtatgagcagattaacaattcagag
gacgaggtcttccaaaactacctttatgattggtatatggagaatggctggtccgagcga
ttgttggaaatcaactcccccttcgtcgtcgagtacctaaaacagagctcggagacaaac
ttggcacatgcggacctactatggcgatactacgctcactacaacgactacctaagtgca
gcggatacacaataccaactcgcgaagagtacgttaccgttgacgctggagaagagaata
gagtatctgtctcgagccaaggccaatgcctcgacgcgcatgaccggtttcgcggatgcc
ggcgtacgtaaccggcaatctcgacaggaactgctacgaaacatcagtgatcatctcgat
atcgccaacatccaagacgatgtgttgcagaggattaggggtgacgaacgactcagtggc
cagcggagagacgaggtcattgcccacctcaacggtcaaatccattctcttgacgagctc
tatcacgactacgcagaccaagcagcatattatgacatttgtctgcttatataccacgcc
gccgactaccgcagtgtacccgatattcgctcgacatggaccaacctcattgatcagacc
catcgtaaagctctagcagatggccaaagtgcaccttgggaggctgttgcactgaaagtt
gaggaccttggtcaccgtaccaacctaaacgacaacgtattcccagtgaacattgtcctg
caactccttctccagtacgacttggaattctacgtgcatgatgcgaatgcgccaaacaca
caaaatctagccttgaactccaacttgacgtggccgatcgacgtcttccttaagattaac
gcgccgtatgagaacttggttgcgaccttggaagcgttgtggtatgcacaagaacagccg
tttgcaggccgcaaccgtaagctgctcgtcaaatggatcgtttacctggtggagcactgg
agtaaagctagtagacggactggtacactcttcggtggccctgagaacgccattggcctt
gctgaggtgatgcgcatcatcttaggcagcgaagtactggggcgagacatggatgatcaa
tcatggatccaacgggcgagagaggtcagcgccactgttgaggaagccgcgcgatga
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