Pyrenophora tritici-repentis: 6349705 Help Entry 6349705           CDS       T10215                                  Symbol PtrM4_000840 Name (RefSeq) hypothetical protein   KO K12880   THO complex subunit 3 Organism ptrr  Pyrenophora tritici-repentis Pathway ptrr03013   Nucleocytoplasmic transport ptrr03040   Spliceosome Brite KEGG Orthology (KO) [BR:ptrr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6349705 (PtrM4_000840)   09122 Translation    03013 Nucleocytoplasmic transport     6349705 (PtrM4_000840)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ptrr03019]     6349705 (PtrM4_000840)    03041 Spliceosome [BR:ptrr03041]     6349705 (PtrM4_000840) Messenger RNA biogenesis [BR:ptrr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      6349705 (PtrM4_000840) Spliceosome [BR:ptrr03041]  Complex C   Other components    EJC/TREX     6349705 (PtrM4_000840)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     6349705 (PtrM4_000840) SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 Beta-prop_WDR3_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_EML DSE1_N CFAP251_N WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_SCAP Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_WDR41 PAC11 choice_anch_I TRM82_WD Cytochrom_D1 Motif Other DBs NCBI-GeneID:  6349705 NCBI-ProteinID:  XP_001941722 LinkDB All DBs Position 1:complement(<218927..>219973) Genome browser AA seq 331 aa AA seqDB search MAPPVRVGSIKKESFAKRFLDFKTSVYQDSLRPASVSSSHYIRSISWNASGTFIATGAAD KTLRIWNPEKTNVKNSTELRTPGASAGSSLERVAFHPINENELASCGTDGMVRFWDIRTK ASVGGVEVGEVPFTLAWTPDGSEIVAGRKDNILARIDRASLSVVSAQRQPLQTNQCVFDW SGSHLYSTAGDGSVRVLQYPSLENALTLNAHTSACYAVSMSPSGEYLAAGGGDALVSIWD TQEWMCVRTLELTGGLVKTVDFSFDGSYITAGSDDKEEKKIRIAHVETGEIVCSFDVATP AAHVAWHPCRYTLAYSADNQGLKIIGAVGGG NT seq 996 nt NT seq  +upstreamnt  +downstreamnt atggcgcctcctgtccgcgtcggttctatcaaaaaggaaagcttcgcaaagaggttcctg gactttaaaacgtcggtataccaggacagcttgcgcccggcctcggtctcatcgtcacac tacatccgctccatatcgtggaacgcgtcgggcacattcatcgcaacgggcgcggcagat aagacgctgcggatttggaaccccgagaagaccaatgtaaagaactcgactgagctgcgt acgcctggcgcaagcgctgggagcagtctcgagcgcgtcgcattccacccgattaatgag aatgaactggccagctgcggcaccgacggcatggtgagattctgggatatacggacaaag gctagtgtgggcggcgtcgaggtgggcgaggtgccgtttacactggcttggacaccagat ggcagcgagattgttgcgggaagaaaggataacatcctagccagaatagaccgagcatcg ctcagcgtcgtctctgcacagcgccaaccactacagacgaaccagtgcgtgtttgactgg tcaggtagccatctctactcgacggccggcgacgggagcgtcagagtgctccaatatccc tcgcttgagaatgcgcttacactaaatgcccacacgtcggcatgttacgctgtatccatg tcaccgagcggcgaatacctggcagctggaggaggcgacgcgctcgtttcgatttgggac acacaggagtggatgtgcgtgcggacgctggagttgactggaggtctcgttaagaccgtc gacttctcctttgacggaagctacatcacggccggctctgacgacaaggaagaaaagaag attcgcattgcgcacgtggagactggtgagattgtgtgcagtttcgatgttgcaacacca gcggcgcatgtcgcatggcacccgtgccgatatacactggcctactcggcggacaaccag ggactgaaaatcataggagccgttggtggaggatga

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