Pyrenophora tritici-repentis: 6349710
Help
Entry
6349710 CDS
T10215
Symbol
PtrM4_000890
Name
(RefSeq) mago nashi protein
KO
K12877
protein mago nashi
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03013
Nucleocytoplasmic transport
ptrr03015
mRNA surveillance pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6349710 (PtrM4_000890)
09122 Translation
03013 Nucleocytoplasmic transport
6349710 (PtrM4_000890)
03015 mRNA surveillance pathway
6349710 (PtrM4_000890)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6349710 (PtrM4_000890)
03041 Spliceosome [BR:
ptrr03041
]
6349710 (PtrM4_000890)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6349710 (PtrM4_000890)
Spliceosome [BR:
ptrr03041
]
Complex C
Other components
EJC/TREX
6349710 (PtrM4_000890)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
PARP
Motif
Other DBs
NCBI-GeneID:
6349710
NCBI-ProteinID:
XP_001941727
LinkDB
All DBs
Position
1:complement(<226339..>227097)
Genome browser
AA seq
170 aa
AA seq
DB search
MNTNEPFYLRYYSGHQGRFGHEFLEFDFRVLGDGRSASARYANNSNYRNDSLIRKEMCVS
DVLVAEIKRIVKESEILKEDDTKWPQKNKDGRQELEIRLGSEHISFETAKIGSLQDVSDS
ADPEGLRVFYYLVQDLKALVFSLISLHFKASARFKNAMFIILIIVQIKPI
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaacgaaccattttatctgcgatactactccggccaccaagggcgcttcgga
cacgagttcttggagttcgactttcgtgttttgggagatggccgcagcgcgtctgctcgt
tatgcaaacaactccaactaccgcaacgactccctcatccgaaaagagatgtgtgtcagc
gacgttttggtagctgagatcaagcgcattgtcaaggagagcgagattctcaaggaagac
gacaccaaatggccacagaagaacaaggacggtcgtcaggagcttgagatccggttgggc
agcgagcacatctcctttgagactgctaagatcggctctctacaagacgtatccgactca
gcggacccagaaggccttcgagttttctactatctcgtccaggacctgaaggctttggtc
ttttccctaatctcacttcacttcaaggcaagtgcacgtttcaaaaatgccatgttcatc
atacttattatagtccagatcaagccaatctaa
DBGET
integrated database retrieval system
