Pyrenophora tritici-repentis: 6349711
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Entry
6349711 CDS
T10215
Symbol
PtrM4_000900
Name
(RefSeq) Vesicle coat complex, various subunit
KO
K17301
coatomer subunit beta
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6349711 (PtrM4_000900)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptrr04147
]
6349711 (PtrM4_000900)
Membrane trafficking [BR:
ptrr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
6349711 (PtrM4_000900)
Exosome [BR:
ptrr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
6349711 (PtrM4_000900)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
Coatomer_g_Cpla
HEAT
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
6349711
NCBI-ProteinID:
XP_001941728
UniProt:
A0A317B956
B2WNE0
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All DBs
Position
1:227727..230863
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AA seq
915 aa
AA seq
DB search
MKKILSIMLNGDPQTGLLMHIIRFVMPSKSKPLKKLMYFFFEVCPKHDSQGKLRQEWILV
CNAIRFDLQAPNEYVRGNTLRFVTKLRDAELVEPLLQPVRQCLTHRHAYVRKNATFAIAS
IFTHLPELMPDAPDLLVSFLDDENDPTCKRNAFAALVSVSHEKALEYLSTVFDAIPNHEE
LLLLAELEFIRKDAIVNPSNKARYLRLIFDLLESQVSTVIYEAAHALTTLTSNPVAVKAA
AGKFVELAIKEPDNNVKLIVLERVDQLRHKNEGVLDDLTMEILRVLSSTDLDVRKKSLGI
AMEMISSRNVEEVVLLLKKELMKTVDEQYEKNPEYRSLLISSIHSAAIKFPEVAASVVGS
LMDFISDVSSNASAVDVISFVKEVVERFPDLRASIIERLVSTLGEVRAGKVYRGVLWIIG
EFSLEAKDIRDAWKGIRSSLGEIPILASEQRLLDEASEGKDPAEQVNGHAKAAAPTGSRK
VLADGTYATESALTSSAAAKAKLEAVKNSQKPPLRQLLLDGDYYLATVLSSTLTKLVMRH
GEISQDAARTNALRAEAMLIMISIIRVGQSQFVKTFIDEDSVDRIMSCVRSLSEFSQRKE
LETVFLEDTRKSFRTMVQTEEKKRAAKEASERAKSAVNVDDSFNIRQLKKKDSDGSDEIE
QDLERATGGDTATEDLTSKLSRVVQLTGFSDSVYAEAYVKVHQFDIVLDVLLVNQTTETL
QNLTIEFATLGDLKVVERPSTQNVGPHDFINIQATIKVSSTDTGVIFGNIIYEGEKGVDS
NVVILNDVHVDIMDYIKPAQCTETQFRTMWTEFEWENKVNINSKAKTLREFLKQLMACTN
MSCLTPEASMKGDCQFLSANLYARSVFGEDALANLSIEKEGDNGPITGFVRIRSRSQGLA
LSLGSLKGLNKVGVA
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagattctctccattatgctcaatggcgaccctcagactggcctgctcatgcat
attatccgatttgtcatgcccagcaagtccaagccgttgaagaagctcatgtacttcttc
ttcgaggtatgccccaagcacgactcccagggcaagctgcgccaggagtggatattggtc
tgtaatgcgattcgtttcgacttacaagcgcccaatgaatacgttcgaggaaatacactg
cgcttcgtcaccaaacttcgagatgcagagcttgtagaaccattactacaaccggtgcgc
cagtgcctcacacaccgacacgcatacgtccgaaagaacgcaacctttgctatcgcatcc
atcttcacacatctccccgagcttatgccagatgcgcccgatcttttggtgtcattcctg
gacgacgaaaacgatccaacatgcaagcgcaacgcattcgccgccctcgtctccgtgagc
cacgaaaaggccctcgaatacctgagcaccgttttcgatgctatacccaaccacgaagag
cttttgctcctcgccgaactggagttcatccgcaaggacgctatcgtgaatccctcaaac
aaagcacgatacctccgcctcatcttcgacctcctcgaatcgcaagtgtccaccgtcatc
tatgaagccgctcatgccctcactaccctcacaagtaacccagtcgcagtcaaggccgct
gcaggaaagtttgtggaattggccatcaaggagccggataacaatgtcaagctgatagtt
ctggagcgggttgaccaactacggcataagaatgagggcgtcttggacgatttgacaatg
gagattcttcgtgttctgtcgagtaccgacttggatgtacgcaagaagtcgctcggcatt
gcaatggaaatgatctccagcaggaatgttgaagaagttgttctgctcctcaagaaggag
ctgatgaagacggtagacgaacagtacgagaagaaccccgaatacaggtcgctgctcatc
tcgtcgatacactctgccgccatcaagttccctgaagtcgccgcgagtgttgttgggtcg
ctcatggacttcatctctgatgtcagcagtaacgcatctgcagtcgacgtcatttccttc
gtcaaggaggtagtagagcgcttccccgatctccgagcctccattattgagcgactggtt
tcgactctcggtgaggtgcgcgctggaaaggtttaccgtggagtactctggatcatcgga
gagttttcgctagaggccaaggacattcgggacgcatggaagggcatccgatcatcacta
ggcgagatcccgatactcgcctctgagcaaaggttgcttgacgaagcttcggaaggcaag
gacccggctgagcaagtgaacggacacgcaaaggcagcagctcccactggatcgcgtaaa
gttctcgccgacggtacctatgcaaccgaaagcgccctcacatcgtctgctgccgccaaa
gcgaaactggaagcagtcaagaactcgcagaagcccccactacgacaacttcttctcgat
ggcgactactaccttgcgacagtcctatccagcaccctgacaaagctcgttatgcgacac
ggagagatctcacaggatgctgcgcgtacgaatgctcttcgtgccgaggcaatgcttatc
atgatttccatcatccgtgttggccagtcgcagttcgtcaagacatttattgatgaagac
tctgttgaccgtatcatgtcttgtgtccgatcgctgtccgagttttcgcagagaaaggag
ctcgagactgtcttcctggaggacacgcgaaagtctttccggaccatggttcagacggaa
gagaagaagcgggcggccaaggaagcatccgagagggcgaagtcagctgtcaatgttgat
gactcgttcaacatccgccaattgaagaagaaggattcagacggcagtgacgagattgag
caagatctggaacgagctactggaggcgacacggcaactgaagatctcacatccaagctg
agccgcgtggtacagctgacgggattctcggattcagtatacgccgaagcttacgtcaaa
gtccaccaattcgacattgtacttgacgtgcttctcgtgaaccagacaacagagacatta
caaaatctcacgattgagtttgctactcttggtgatctcaaggtagtagagcgcccttcg
acacaaaacgttggcccccatgatttcatcaacattcaagccacgatcaaggtctcatca
accgacactggtgtcatttttggtaacatcatttacgaaggtgaaaagggtgttgactcg
aatgttgtcatcctcaacgacgtccatgttgacatcatggactacatcaagccggcacag
tgcacagagacgcagttccgaacaatgtggaccgagtttgaatgggagaacaaggtcaac
atcaactcaaaggccaagacgctgcgcgagttcttgaagcagctcatggcatgtacaaac
atgagctgcttgactccagaagcgtcgatgaagggcgactgccagttcttgtcggcgaac
ttgtatgctagaagtgttttcggtgaggatgcccttgccaatttgagcatagaaaaggaa
ggagacaacgggccaatcacaggtttcgtgcgtatacgaagtcgctcgcaaggcctagca
cttagtttggggtcattgaagggcctgaacaaggtcggagtagcatga
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