Pyrenophora tritici-repentis: 6349723
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Entry
6349723 CDS
T10215
Symbol
PtrM4_001020
Name
(RefSeq) RecA, RecA-RadA recombinase
KO
K04482
DNA repair protein RAD51
Organism
ptrr
Pyrenophora tritici-repentis
Pathway
ptrr03440
Homologous recombination
ptrr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
6349723 (PtrM4_001020)
03460 Fanconi anemia pathway
6349723 (PtrM4_001020)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptrr04131
]
6349723 (PtrM4_001020)
04121 Ubiquitin system [BR:
ptrr04121
]
6349723 (PtrM4_001020)
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6349723 (PtrM4_001020)
Membrane trafficking [BR:
ptrr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
6349723 (PtrM4_001020)
Ubiquitin system [BR:
ptrr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
6349723 (PtrM4_001020)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
6349723 (PtrM4_001020)
RecA family proteins
6349723 (PtrM4_001020)
FA (Fanconi anemia) pathway
Other FA pathway factors
6349723 (PtrM4_001020)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
RecA_N
AAA_25
HHH_5
ATPase
DnaB_C
AAA_22
PAXNEB
AAA_24
Motif
Other DBs
NCBI-GeneID:
6349723
NCBI-ProteinID:
XP_001941739
LinkDB
All DBs
Position
1:<255575..>256766
Genome browser
AA seq
348 aa
AA seq
DB search
MSNEEEQYEDSTMGGPGAPTPVSALEGVNGLTARDIKLVIEGGYNTVESIAYTPRRALEQ
IKGISEQKASKLLAEASKLVPMGFTTATEMHSRRSELISITTGSKQLDTLLAGGIETGSI
TEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDTEGTFRPVRCLAVANRYGLSG
EEVLDNVAYARAYNSDHQLELLNQAAQMMTETRFSLLVVDSATALYRTDFAGRGELSARQ
THLAKFMRTLQRLADEFGIAVIITNQVVAQVDGGPSAMFNPDPKKPIGGNIIAHASTTRL
SLRKGRGETRVCKIYDSPCLPESDCLFAINEDGIGDPKEKDLEERNNR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaagaagagcagtatgaggacagcacgatgggcggtcctggtgcgccaact
ccagtatctgcgcttgagggagtaaatggactgactgcacgcgatattaaactggttatc
gaaggtggctacaacacggtagaatcgattgcttatacaccacgacgagcactcgaacaa
ataaagggcatatcagagcagaaggcgtccaagttacttgctgaggcctctaaacttgtg
cccatgggctttaccacggctaccgagatgcactcgcgtcgaagcgaactcatttcgatt
acgacgggatcaaaacagctggacacactgcttgcgggcggcatcgagactgggtctatc
acggagatatttggcgagttccgaacaggaaagagtcagatctgtcacacgcttgccgtg
acatgccagttgccgttcgacatgggaggcggtgagggaaagtgcctatatatcgatact
gaaggcactttccgtccagtgcgatgtctggccgtggcaaatcgttacgggctttctggc
gaggaagtgctggacaatgtcgcgtatgcgcgcgcatataactcggaccatcagctggag
cttctcaatcaggccgcgcagatgatgacggagacacgcttctctttacttgttgtggat
tccgccacagcgctatatcgtaccgattttgcagggcgtggagaactttcggcaagacaa
acacatcttgccaagttcatgcgcacgctgcaacggcttgccgatgagtttgggatcgct
gttattatcacgaaccaagtggttgcgcaagtcgatggtgggcctagtgccatgttcaac
cctgatcccaagaagcccatcggaggaaacattattgcgcacgcaagtacaactcgtctg
agtctgagaaaaggccgaggagaaacgcgtgtgtgcaagatctatgacagcccttgtctc
ccagagagcgattgtttattcgccatcaacgaggacggcatcggcgaccccaaggagaag
gatctggaggagagaaacaacaggtga
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