Pyrenophora tritici-repentis: 6349758
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Entry
6349758 CDS
T10215
Symbol
PtrM4_001370
Name
(RefSeq) RNA-binding protein (RRM domain)
KO
K14411
RNA-binding protein Musashi
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6349758 (PtrM4_001370)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrr03019
]
6349758 (PtrM4_001370)
Messenger RNA biogenesis [BR:
ptrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6349758 (PtrM4_001370)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
SET1_RBD
TMEM156
Motif
Other DBs
NCBI-GeneID:
6349758
NCBI-ProteinID:
XP_001941774
UniProt:
A0A5M9LFD0
B2WMZ4
LinkDB
All DBs
Position
1:complement(<365865..>367355)
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AA seq
472 aa
AA seq
DB search
MFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKE
HYLDGKIVCKPSTITKLPANANEIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFK
QFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLREPLQILGKQIEVKRAQPRGNMR
DEEGGDGGKKFGRNNKFNKFNDGGNGNHGGGGYDNSGGNMQAQGGNSAMSPAMMAQYWQR
MQQYFQSMQQTLAQQQAGGGMAGNPMAAMGGMNPMQMQQMQQQMMGQGMNRGTGSPNPQM
MGGPGSMNPMQMQQMQQMQMAQMQGGGGPGGPGGPGMMSPQGGQNPGQRPAYNPQDQLAF
EQQKYEQQQARRQQQLSGPAGYANAQGGPQSWDGMYDDAPPPPSGPGGPGRGGFRNNRSR
QGSSQPPAGGGQAPINAPTGPKNAGVRGANYRGGGHRGGGGFRHQPYGGRGG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtttataggtggacttaactgggagaccacggaagaatctctaaaaaactatttctca
cagttcggcgaagtcagcgagtgcaccgttatgcgtgactctgctaccggacgatcgcga
ggcttcggtttccttaccttcaaagaccccaagtgcgttaacattgtcatggttaaggag
cattaccttgatgggaagatcgtatgtaaacccagtaccattaccaagctacccgctaat
gccaacgagatcgatcccaagcgtgctattcctcgtgaggagcaagagcggaccagcaag
atcttcgtcggtggtgtcagccaagaagcaaccgaggaagacttcacaaacttcttcaag
cagttcggtcgcgtcgtcgatgctacactcatgatggataaggagactggtcgacctcgt
ggtttcggtttcgttactttcgacggcgatgctgccgtagatgccaccctacgcgaaccg
ctccagattctcggcaagcagattgaggtcaagcgcgcccagccccgtggcaacatgcgc
gatgaagaaggaggcgatggcggcaagaagtttggtcgtaacaacaaattcaacaagttc
aacgacggcggaaatggtaatcacggtggcggaggctatgataacagcggcggtaacatg
caagcccaaggtggaaacagcgccatgtctcccgccatgatggcacagtattggcagcgc
atgcaacagtacttccaatctatgcagcaaacactcgctcagcagcaggcaggcggcggt
atggctggcaaccccatggctgccatgggtggcatgaacccaatgcaaatgcagcagatg
caacaacagatgatgggccaaggcatgaaccgcggcaccggatctcccaacccccagatg
atgggtggcccaggcagtatgaacccgatgcaaatgcagcagatgcagcagatgcaaatg
gcgcagatgcaaggcggcggtggcccaggaggacccggcggaccaggtatgatgagccca
caaggaggacaaaatcccggacagcgtcccgcttacaacccgcaagaccaactcgctttc
gaacagcaaaagtacgaacaacagcaagctcgtcgccagcaacagctctctggtcccgct
ggctacgccaacgcccagggtggccctcagagctgggatggcatgtacgacgatgctccc
ccaccaccctctggccccggtggccccggtcgcggcggctttaggaacaaccgttctcgt
cagggctccagccagccgcctgctggtggtggtcaggctcctatcaacgcgcctaccggt
cctaagaacgcgggtgttaggggtgccaactaccgtggtggaggtcaccgcggtggcggc
ggcttcagacaccaaccctatggaggtcgcggtggttga
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