Pyrenophora tritici-repentis: 6349806
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Entry
6349806 CDS
T10215
Symbol
PtrM4_001930
Name
(RefSeq) hypothetical protein
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03030
DNA replication
ptrr03410
Base excision repair
ptrr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
6349806 (PtrM4_001930)
03410 Base excision repair
6349806 (PtrM4_001930)
03420 Nucleotide excision repair
6349806 (PtrM4_001930)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptrr03032
]
6349806 (PtrM4_001930)
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6349806 (PtrM4_001930)
Enzymes [BR:
ptrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
6349806 (PtrM4_001930)
DNA replication proteins [BR:
ptrr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
6349806 (PtrM4_001930)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
6349806 (PtrM4_001930)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
6349806
NCBI-ProteinID:
XP_001941821
UniProt:
A0A834S4T1
B2WN41
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All DBs
Position
1:complement(<525032..>527448)
Genome browser
AA seq
589 aa
AA seq
DB search
MATARRPEKPSVPSDLIPSSSPAFGTPVHPINPRRTAPIKAPPALKPAAKSTVLPILLPP
ATLRPLAFRTFTKKHNLTLTSSALQALATFIGKHCGSGWREEGLAEKVLEEIAKSWKKCG
GQVIVEGDNETLKGILKTLEGSMSGGRVVQGSSLGRQSSFNFGPDISGQMTRPSIDSNTS
FGMSNLQVEDKEEEEEVSKDPRDWIKVIGAFEQPKLIYNFTQKHFEKSATKPSLFPNPSH
KTELFRQRYHIVHQRILRNETFQAPTFSTARSSTLNRTGSIATSQMNSITPIANLLGRTG
STHLLLGMLTVSATGALSLSDLTGTITLDIQHARPIPENGAYFAPGMIVIVEGSYEEDSG
TTSTLGGNGGIGGTIGGKFLAFSVGHPPCERRTATLGGAEEVDKNSLAGPAFGWTDFLGV
GSQRATGTRMNKIAAKLLDPDHAHNVVIASDLHLDVPSTLSALRTLLRTYTPDPTDAHPV
YPLAIILMGNFSSKASLAGVPGTSSIEYKEHFDALASVLADFQPLIAHTTLVLVPGDNDA
WPSAFSAGAATPLPRKQIPTMFTSRIRKVVAEANREIWGAGKAKGKEGE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaaggcgaccagagaagccatcggtgccctcagacctcattccatcctca
tcgccggcattcggaacaccagtccatcccatcaatccccgcagaacagccccgatcaag
gccccgcctgcactcaaacccgccgcaaagtcgactgtcctccctattcttcttcctcca
gcaaccctacggccgctagcgtttcgaacgttcaccaagaagcataacctcaccctcaca
tcttccgctcttcaagcattagcaaccttcatagggaaacactgcggctcaggatggcga
gaagaaggcttagcagagaaggtcctggaggaaattgccaaaagctggaagaaatgcggc
ggccaggtcattgtagagggagacaatgagacgctcaagggtatcctcaagacattggaa
gggtcaatgagcggtgggagagtagtccagggctcgagtctcggcagacaaagcagcttc
aactttgggccggatatatcaggacagatgactcgtccgtcaatagacagtaacacaagt
tttggcatgtcgaatctgcaagtggaggacaaggaagaagaggaagaagtatcgaaagat
cctcgagactggatcaaggttatcggggcttttgagcagccgaaattaatatacaacttc
acccagaagcattttgagaaatctgctacgaaaccatcactattccctaatccctcgcac
aagactgagctgtttcgccaacgctaccatatcgtacatcagcgcatactcagaaatgag
acattccaagcaccgaccttctcgaccgctcgttcatctactttgaatcgtactggatcg
attgcgacgtctcaaatgaactcaattaccccaatagccaatctgcttggccgaactgga
agcacacatttgttgttagggatgcttacagtgtcagcgactggtgctctgtcactttct
gatcttacaggtacaattacccttgatatccaacacgcacgtcctatcccggagaacggc
gcctacttcgccccgggcatgatcgtcatagtcgaaggcagctacgaggaagacagtggg
acaacgtcaaccctaggaggcaatggtggtatcggcggcacgataggcggcaaatttctc
gctttttcagttggtcacccgccatgtgaacgacgtacagcaacattaggtggtgccgaa
gaagtagacaagaacagccttgctggaccggcattcggttggacagatttcttaggtgta
ggatcacaacgtgcgacaggaactcgcatgaacaagatagctgcgaaactgctcgacccg
gaccacgcacataacgttgtcattgcatcagatctacatctcgacgtcccttctaccctc
tccgctcttcgaactcttctacgaacatacacccccgacccaacagacgcacatcccgta
taccccctcgccatcatcctcatgggcaacttcagctcaaaagccagtctcgcaggcgta
cccggcacaagcagcatagaatacaaggaacatttcgacgccctcgcctccgtcctcgca
gacttccaacccctcatcgcacacacaacactcgtccttgttcctggcgataacgacgcc
tggcccagtgccttctctgccggcgccgcaacacccttaccccgaaagcagatccccaca
atgttcacctcgcgaatccggaaagtagtcgcagaagcaaatcgcgagatctggggcgca
ggtaaagccaaaggcaaagagggtgagtaa
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