Pyrenophora tritici-repentis: 6349887
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Entry
6349887 CDS
T10215
Symbol
PtrM4_029600
Name
(RefSeq) HepA, Superfamily II DNA-RNA helicase, SNF2 family
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
6349887 (PtrM4_029600)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
6349887
NCBI-ProteinID:
XP_001941901
UniProt:
B2WNL0
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All DBs
Position
1:7686316..7688754
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AA seq
812 aa
AA seq
DB search
MHRPKSLANGEATPAKPAARLYGGTSQSTERLIKPFRCPGSATVTRVSEKPARKRRKVDY
SGAGGEDGESDKAYSNEDRLALATRDANRFPVFKPKAKDTAFKTKFIVPLVNKDTGAYNP
NRPAPLLGMRTGTVFVARPLHDPSGEFAIVLYDPTVDDKPIPKGEIEPKLSQPEKKELEA
PIVHKSLAEILGLKKKVEGERPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKAN
GCIMADEMGLGKTLQCIALMWTLLKQSPEAGKSTIQKCVIACPSSLVRNWANELIKWLGK
DAVTPFAIDGKASKEELIQQIRQWSIASGRSVVRPVLIVSYETLRLYADEFGQTPIGLML
CDEGHRLKNGDSLTFTALNNLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFR
KHYEIPILKGRDANGTDEDVKKGTERLTELLGLVNKFIIRRTNDILSKYLPVKYEHVVFC
NLAPFQKDLYNHFIKSPDVQSLLRGKGSQPLKVIGMLKKLCNHPDLLNLPEDLPGCENTL
PDDFVQKDARGRDREVKTWYSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCR
SRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEFVFLLSSKAGGCGLNLIGANRLVLFDPD
WNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVER
HFSLDSLRELFQYRNNTTSDTHDTFKCKRCRKEDGRQIIKAPAMLYGDTSTWNHFVNDGE
NGPLGKIQDLLLRQETTNDLRDVSAVFQYISH
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggccaaaatctctcgccaatggtgaggcgacaccagcgaagcccgcagcgcgt
ctgtatggaggcacttcgcagtcgaccgaacgtctcattaagccctttcgatgtcccggc
tctgcaacagtgacccgtgtatcagagaagcctgcgagaaagaggcgaaaggtcgactat
tccggcgctggtggtgaagatggagaaagcgacaaggcgtactcgaatgaagatcgcctc
gctcttgccacacgagacgcgaaccgctttccagtcttcaagcccaaagccaaggatacg
gcgttcaagaccaagttcatagtgcctctagtcaacaaagatacaggggcatataatccg
aatcgacctgcgccgctactcggtatgcgaacaggaactgtatttgttgcacggcctcta
cacgaccccagtggagaatttgctatagtactatacgatcccactgtcgacgacaaacca
ataccgaaaggggaaatcgagccaaagctgagtcagccagaaaagaaggagttggaggca
ccaattgtgcacaagagtctggctgagatactgggcttgaagaagaaggtggagggtgaa
cggccacgcgtgccggttgtcattgatccgagactcgccaaagttctacgaccgcatcag
gtcgaaggtgtcaagttcttgtacagggctacaactggcatgattgatccaaaagccaat
ggttgtatcatggcagacgagatgggtcttggtaagacgttgcagtgcattgcgcttatg
tggacccttctgaagcagtctcccgaggctggaaagtccaccatacagaaatgcgtcatc
gcgtgtccgtcaagtttggtgaggaattgggcaaacgagcttatcaaatggcttgggaaa
gacgccgttactccttttgctattgatggaaaggcatcgaaggaagagttgattcagcaa
atacggcagtggtcaatcgcatccgggcgttcagtagtcagacctgtcctgattgtgtca
tacgaaactctgcgtctctatgccgacgagtttgggcagacacctatcgggttaatgctt
tgcgacgaaggccatcgactgaagaatggtgacagcttgacctttactgctctcaacaac
ctgaacgtacaacgaagagtcatcctttccggtacacccatccagaacgatctctcggag
tactttgcattacttaactttgcgaacccgaattacctcggcacacgaatggagttccgc
aagcattacgagatacctattctgaagggtcgcgatgctaatggaaccgacgaggatgtc
aaaaagggcacagagcgtctcacagagctactgggccttgtcaacaaattcatcatccgg
cgaaccaacgacatcctctccaagtatctcccagtcaagtacgagcatgttgtgttttgc
aaccttgcgccgttccagaaggacttgtacaaccatttcatcaaatctcccgacgttcaa
agcctgctccgtggcaaagggtcgcagccactcaaggtcattggcatgctcaagaaactt
tgcaaccaccctgatctactcaaccttcctgaagatcttccaggatgtgaaaacacgttg
cccgatgactttgtgcagaaagatgcgagaggtagggatcgagaggtcaagacatggtat
tccggaaagatggctgttctggaccgcatgcttgcccgtattcgtgccgagaccaacgac
aagattgtcctcatctccaattacacccagacgcttgatatcttcgcaatgctgtgtcgt
tcgcggggatatggctgcttccgtctagatggcacaatgaacgtcagcaaacggcagaag
ctggttgacaagttcaatgatccagagagccctgaatttgtcttccttctttcatccaag
gctggtggatgcggtctcaatttgatcggcgccaacagacttgttctcttcgaccctgat
tggaaccccgccgccgatcagcaagccctcgcgcgtgtatggcgtgatgggcagaagaag
gactgtttcgtataccgcttcatcactaccggtaccattgaagaaaaggtattccagcga
caatcacacaagcagtcactctcttcttgtgtcgtcgactcggcagaagacgttgagcgc
cacttcagtctcgactctctccgcgagcttttccaataccgcaacaacacaacgagcgac
acccacgacacattcaagtgcaagcgctgtagaaaggaagacggaagacaaatcatcaaa
gccccggccatgctgtatggtgatacaagtacttggaatcactttgtcaatgatggcgag
aatggtccgctaggcaagattcaagatctgctgcttaggcaggagacgacaaatgatttg
agggatgtcagtgctgtgtttcagtacattagtcattga
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