Pyrenophora tritici-repentis: 6350317
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Entry
6350317 CDS
T10215
Symbol
PtrM4_100330
Name
(RefSeq) BING4CT multi-domain protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrr03009
]
6350317 (PtrM4_100330)
Ribosome biogenesis [BR:
ptrr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
6350317 (PtrM4_100330)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR3_2nd
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
PAC11
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
DSE1_N
Motif
Other DBs
NCBI-GeneID:
6350317
NCBI-ProteinID:
XP_001942330
UniProt:
B2WPT9
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Position
5:<149606..>151270
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AA seq
554 aa
AA seq
DB search
MATERGEKPSTAVRRKSQNSAPVQDEDARAIAEFTEKATQQYGRGERIRPKSVKDKKLRS
NIKALEAKNKQAAIEAKNVEVLLEHNAGLLEPETELERTYRVRQDEIKREVSIETAKKSF
ELRLDGLGPYDVCEYSRNGRDLLIAGRKGHVATFDWRDGKLGCELQLNETVRDARWLHTS
NQKNFAVAQKKCVYIYSGDGVEMHQLKNHAEATHLEYLPYHFLLASVSTAGIIRYTDVST
GQSLPQLYTKLGPSTAFAQNPHNAILHVGHQKGLVTLWSPNSATPLVKLLPHRGPVRSIA
IDRSGTYMVSTSQDRRMSVWDIRMFKELHSHHLRVPGTTLSISDRNLTAVGYGTQAAIYK
DDLFRLHADSQPPPTMPYMAWGGAGQNISRVRFCPFEDILGLSHDAGFSSIIVPGAGEPN
PDTLEPGTNPYETSKQRRETEVHALLEKIQPEMIALDPNFIGNLDLASHEERQKEYKARR
GEREPDKVDLLKKRGKGRNSALRRYLRKSGSRNVIDEEKERAREAMRSLQKRQVEKRERL
KKEYGPALERFARK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaacgcggggaaaagcccagcaccgcagtccggcgcaagtcgcaaaacagc
gcaccagtccaagacgaagatgcccgcgcaatcgcagagtttaccgaaaaggccacacaa
caatacggtcgcggcgagcggatacggcctaaatcagtaaaggacaagaagctccggtcg
aatatcaaagcgctcgaagcgaagaacaagcaggcggcgatagaggcaaagaatgtcgag
gtcctccttgagcacaatgcgggcttgttggaaccagaaactgagctggaaagaacatac
agggtacggcaagatgagatcaaacgcgaggtcagcatcgagacggcaaagaagagcttt
gagctgcggttagacggtctaggaccgtacgatgtatgcgagtacagtcggaatgggcgt
gatcttctgatcgcgggcagaaaagggcacgtcgccacgtttgactggagagatgggaaa
ctgggctgtgaactccaactcaacgagacagtgcgagatgcgcggtggttacacaccagc
aaccagaagaactttgccgtggcgcagaagaagtgcgtctacatctactcgggcgacggt
gtggagatgcaccagctcaagaaccacgccgaagccacacacctcgaatacctgccttac
cacttcctcctcgcctcggtgtcaacggccggcataatacgatacaccgacgtctcgacc
ggtcagtcgctgccacaactatacaccaaactcggtccttctacagcttttgcgcaaaat
cctcacaatgccatccttcacgttggtcaccaaaagggtctcgtcacattatggtcaccc
aacagcgctacaccactcgtaaagctcctcccacaccgcggccccgtacgtagtatcgca
atcgaccgatcaggcacctacatggtcagcacatcgcaagaccgacgcatgtccgtctgg
gacataaggatgttcaaagagctacactcgcaccatctgcgcgtgccaggaaccacactc
tcaatctcagaccgcaacctcacagccgtgggatacggcacccaagctgccatctacaaa
gacgacctattccgcctacacgcagactcgcaaccccccccaacaatgccgtacatggcc
tggggcggtgccggccaaaacatctcccgcgtccgcttctgccccttcgaagacatcctc
ggcctctctcacgacgcaggcttctcctccatcatcgtccccggcgccggcgaaccaaac
cccgacaccctcgagcccggcacaaacccctacgaaacctccaagcaacgccgcgaaaca
gaagtccacgccctgctcgagaagattcaacccgagatgattgctctcgaccccaatttc
atcggtaacctcgacctcgcgtcgcacgaggagcggcagaaggagtataaagcccgcagg
ggcgagcgggaacccgacaaggttgatttactgaagaagagggggaaggggaggaatagt
gcgttgaggaggtatttgaggaagagtgggagtcgcaatgttattgatgaggagaaggag
cgggcgagggaggcgatgcgcagtttgcagaagaggcaagtagagaagagggagaggttg
aagaaggagtatggaccggcgttggagaggtttgcgcggaagtga
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