Pyrenophora tritici-repentis: 90957421
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Entry
90957421 CDS
T10215
Symbol
PtrM4_128690
Name
(RefSeq) PRP38 multi-domain protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
90957421 (PtrM4_128690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
90957421 (PtrM4_128690)
Spliceosome [BR:
ptrr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
90957421 (PtrM4_128690)
Complex C
U4/U6.U5 tri-SnRNP related factors
90957421 (PtrM4_128690)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
90957421
NCBI-ProteinID:
XP_065960883
UniProt:
A0A2W1HLB5
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All DBs
Position
7:1186846..1187829
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AA seq
226 aa
AA seq
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MSKPEFDRADASALLDDRGYRGKLIRGQNPALLFEKGVRERITESYYWKEQCFGLNAATL
CDRAAELKFIGGTTGINGKPTPFLCLAFKMLQLVPDKDIILEYLNFHAENGHISDTDSTT
AAAKKTLDLNAKGKLGNFKYLRCLAAFYIRLAWEPVEIYTTLEPLLTDYRKIKRRLKDAF
TLTYIDQFVDDLLTKERICGTSLWKLPSRANLEDLDIRRRDYNDEE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccggaatttgaccgcgccgacgccagcgcgctccttgacgaccgaggatac
agaggcaagctcattagaggccaaaaccctgccctcctcttcgaaaaaggtgtacgtgag
cgcatcaccgaatcctactactggaaagagcaatgcttcggtctgaacgccgcaacccta
tgcgaccgcgccgcagaactcaagttcattggtggcacaaccggcatcaacggcaaacca
accccgttcctctgcctcgccttcaagatgctacagctcgttcccgataaagacataata
ctcgaatacctcaacttccatgcagaaaacggacacatctcagacaccgactccacgacc
gccgccgcaaagaaaacgctcgacctaaacgcaaaaggcaaacttggaaacttcaaatac
ctccgctgcctcgctgccttttacatccgcctcgcctgggaacccgtagaaatctacacg
acactcgagccgctcctcacagactaccgcaagatcaagcgccggctcaaagatgccttt
acactcacctatatcgaccagttcgtcgatgatctcttgaccaaggaacgcatctgcggc
actagtctgtggaagttgccgtcgagggcgaatctggaggatctggatatccgccgacga
gactataatgatgaggagtga
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