Pseudomonas tritici: HU722_0002305
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Entry
HU722_0002305 CDS
T07594
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU722_0002305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrt03019
]
HU722_0002305
03400 DNA repair and recombination proteins [BR:
ptrt03400
]
HU722_0002305
Enzymes [BR:
ptrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HU722_0002305
Messenger RNA biogenesis [BR:
ptrt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HU722_0002305
DNA repair and recombination proteins [BR:
ptrt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HU722_0002305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QXH84337
UniProt:
A0A8F4WYD7
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All DBs
Position
533631..535568
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AA seq
645 aa
AA seq
DB search
MHDTLQQVFGYPQFRLGQEQTVNAVLAGRSAAAIFPTGSGKSLCYQLSAVLLPHLTLVVS
PLLALMQDQLGFLQRHGISAGSIDSAQSRDEANDVMARARSGELKILMVSVERLKNERFR
NFLQSVQISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQALLLTATATPKVIADM
QAKFAIAPDDVVTTGFYRPNLNLLVEPVSGADKRRRLVQWMSERANQPSIVYVTLQKTAE
QIAEHLNRNGIQAEAYHAGLPHDKREGIQQRFMDGRSNCIVATIAFGMGIDKSDIRNVVH
FDLPKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFVYGDTPEQDGIHRVLEELQ
AARGDGQWEFLLRSLSDHSNIRELPLKTLLVQLELKGVVAPRYAFYAEYRFKYLIEPEAL
LARFSGERQQFVAAIIQVCKRAKTWATVDFDALYQQHNAERSRVVKALDYFQEQGLIELE
SKQMTEVYSLLDTDFDPQVLSTELYTGFKQHEVGEVARIHAMLDLFATERCLGQRLAQYF
GDENAPQRCGHCSVCHGHVAHLPPPPGLPPLVDKNFMGLCGDFIHRHHEHTGELPGAERL
TRFLGGISVPLFTKLKARGIPGFAALEDYPYAEVREWAQAHLNDL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacaccctccagcaggtctttggttatccacagtttcgtttgggccaggagcaa
acggtcaacgccgtactggccggtcgttctgcagcggcaatttttcctaccgggtcgggc
aagtccttgtgttaccagctgtcggcggtgttgctgccgcacctgacgctggtggtgtcg
ccgctgttggcgttgatgcaggaccagcttggttttttgcagcgtcacggtatttcggca
ggcagtatcgattcggcccagagccgcgatgaggccaatgacgtgatggcccgtgcgcgc
tcgggtgagttgaaaatcctgatggtttcggtggagcgcttgaagaacgagcgcttccgt
aacttcctgcaaagcgtgcaaatctcgctgctggtggtggacgaggcgcactgtatttcc
gagtggggccacaacttccgcccggactatctgaagctgccggactaccagcgccagttc
aatatcccacaagcgctgttgctgacagctacagcgacgcccaaggtgattgccgacatg
caggcgaagttcgccattgcaccggacgatgtggtcaccacgggcttctaccggcccaac
ctcaatctgttggtggaacccgtcagcggtgcggacaagcgtcgtcgtttggtccagtgg
atgagtgagcgcgccaatcaacccagcatcgtctacgtcacactgcagaaaaccgccgag
cagattgccgagcacctgaaccgcaacggtatccaggccgaggcctatcacgccggtctg
ccccacgataagcgcgagggcatccagcagcgcttcatggacgggcgctccaattgcatc
gtcgccaccatcgcgtttggcatgggcatcgacaagagtgacatccgcaacgtggtgcac
tttgacctgcccaagtccatcgagaactacagccaggaaatcggtcgcgcggggcgtgat
gggcagccgtctgactgcctggtgttggccaaccgcgacagtctcaatgtgctggaaaac
ttcgtctacggcgatacgccggagcaggacggtatccatcgggtgctggaagaattgcag
gccgcgcgcggcgatgggcagtgggagtttttgctccggtctttgtcggaccacagcaat
atccgcgaactgccgttgaagaccctgctggtgcagctggagctaaagggcgtggttgcg
ccgcgctacgcgttttatgccgagtaccgcttcaagtacctgatcgagccagaggctttg
ctggcgcgattctccggcgagcggcagcagttcgtggcggcgatcatccaggtatgtaaa
cgagcgaaaacctgggcgacggtggatttcgacgcactttatcaacagcacaatgccgaa
cgcagccgggtggtgaaggcgctggattacttccaggagcagggcctgatcgagctggaa
agcaagcagatgacggaggtctacagcctgctggataccgattttgatccacaggtcttg
agcactgagttgtacacaggcttcaagcagcatgaggtgggcgaggtcgcacgaattcat
gcgatgctcgatctgttcgccaccgagcgctgcctggggcagcgcctggcgcagtatttc
ggcgatgaaaatgcaccgcagcgttgtgggcattgctcggtgtgccacggtcacgtcgcg
cacctgccgccaccgccaggcttgccgccgcttgtggataaaaacttcatggggctgtgc
ggtgattttatccacaggcatcatgagcacaccggagaactgccgggcgcggaacgactg
acacgtttcctcggcgggatcagtgtgccgttgtttaccaagttgaaggcgcggggtatt
cccggtttcgctgcgttggaagattacccttacgctgaagtacgcgagtgggcgcaggcc
catttgaatgacctgtaa
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