Pseudomonas tritici: HU722_0004940
Help
Entry
HU722_0004940 CDS
T07594
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptrt
Pseudomonas tritici
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrt03400
]
HU722_0004940 (phrB)
Enzymes [BR:
ptrt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HU722_0004940 (phrB)
DNA repair and recombination proteins [BR:
ptrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HU722_0004940 (phrB)
Prokaryotic type
HU722_0004940 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
QXH84828
UniProt:
A0A8H9Z2Y2
LinkDB
All DBs
Position
complement(1142178..1143623)
Genome browser
AA seq
481 aa
AA seq
DB search
MHLIWLRTDLRLHDNTALTAASQRGPMAAVYLITPEQWLAHDDAPCKVDFWLRNLQALSK
TLGELNIPLLIRTAATWDQAPSVLSMLCRELSVESVHVNEEYGIHESRRDAAVSKALQAA
GVTFHSYLDQLFFQPGSVLTKTGTYFQVYSQFRKVCYTRLHSALPQMVAAPKAQAALKLK
SDPIPNTVEGFEPPSDTLRALWPAGEDEARRRLDAFADQQISYYKDERDFPAKPGTSQLS
AYLAAGVISPRQCLHAALQTNGGEFESGDMGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRNAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDSEGVFIK
HWLPELATLNKKDVHNPEAAGGLFGVADYPRSIVDLKKSRERALAAFRSLPSRHAAGGEY
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgatctggctgcgcaccgacttgcgcctacacgacaacaccgccctgaccgcc
gcgagccagcggggtccgatggcggccgtgtatctgattacacccgagcagtggctggcc
cacgacgatgcgccgtgcaaagtggatttctggctgcgcaacctgcaggcgcttagtaaa
acgctgggcgagttgaacattcccctgctgattcgcaccgcagccacctgggaccaggcg
cccagcgtgctgagcatgctgtgccgcgaactctcggtggagtcggtgcacgtcaacgag
gaatacggcattcatgaaagccgtcgcgatgcggcagtgtccaaggcattgcaagcggca
ggcgtcactttccacagctacctggatcaactgttcttccagcctggcagtgtgctcacc
aagaccggcacttactttcaggtctacagccagttccgcaaggtctgctacacccgcctg
cacagcgcgttaccgcagatggtggcagcgccaaaggcccaggctgcgctcaagctgaaa
agcgatcccatcccgaacacggtcgaaggtttcgagccgcccagcgacacgctgcgtgcc
ctctggcccgccggtgaagacgaggcccggcgccgcctcgacgccttcgccgaccagcag
atcagctactacaaggacgagcgtgacttcccggccaagcccggcaccagccagctctct
gcctacctcgctgcgggggtcatttcgccgcgccaatgcctgcacgccgcgttacaaacc
aacggtggcgagttcgagagtggcgacatgggcgccatcacctggatcaatgaattgctg
tggcgcgagttctacaagcacatcctggtgggttacccacgggtgtcgcgccaccgtgcg
ttccgccccgaaaccgaagccgtggcctggcgcaacgcgcccaaggatctcgccgcgtgg
caggaggcgcgcaccggcctgccgatcatcgacgccgccatgcgacaactgctggagacc
ggctggatgcacaaccgcctgcgtatggtcgtggcgatgttcctgaccaagaacctgctg
atcgactggcgtgaaggcgagcgcttcttcatgcgtcacctgatcgatggcgacctggcc
gccaacaacggcggctggcagtggagctcatccaccggcaccgactcggcgccgtacttc
cggattttcagccctctgagccagtcggaaaaattcgacagcgaaggcgtctttatcaag
cactggctgccggaactcgccacgctgaataaaaaggatgtgcacaaccccgaagccgcc
ggtggtttgttcggcgtggccgactacccacgctcgattgtcgacctgaagaaatcccgc
gaacgcgccttggccgctttccgcagcctgccctcgcgacacgccgcagggggtgaatat
gagtga
DBGET
integrated database retrieval system
