Pseudomonas tritici: HU722_0006215
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Entry
HU722_0006215 CDS
T07594
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU722_0006215 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptrt03019
]
HU722_0006215 (rhlB)
Enzymes [BR:
ptrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU722_0006215 (rhlB)
Messenger RNA biogenesis [BR:
ptrt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HU722_0006215 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QXH86564
UniProt:
A0A8F5AET3
LinkDB
All DBs
Position
complement(1409707..1411167)
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AA seq
486 aa
AA seq
DB search
MTVLKALKKMFGKSEAEPLAPDSSAPVSITGSRNDGEQPGRTAPVAQPKVTPPEQATPAA
AAPAPVAPKPRRERAPKPVVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIQDLGFPYC
TPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAP
TRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDFNQR
GDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKAERQTLLFSATFTEDVMNLAKQ
WTTDPSIVEIEALNVASENVEQHIYAVAGADKYKLLYNLINDNGWERVMVFANRKDEVRR
IEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINF
TLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIETLLGRKISCETPSTHLLRA
VERKRP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atcaccgtgctcaaagcactcaagaagatgttcggcaaaagcgaggctgagccgctcgcg
cctgattccagtgctcctgtctctattaccggcagccgcaacgacggtgaacaacccggc
cggacagcacccgttgcccagccgaaggtgacaccgcctgaacaggcaacaccggcggca
gccgctcccgcgccagtggctccaaagcctcgccgcgaacgcgcaccaaagccggtcgtc
atcccctggaagctcgaagacttcgtcgtcgaaccccaggaaggcaagacccgcttccac
gatttcaaactggccccggaactgatgcacgccatccaggacctgggtttcccgtactgc
acgccgatccaggcgcaggtgctgggctttaccctggcgggcaaggacgccatcggccgc
gcccagaccggtaccggcaagaccgccgcgttcctgatttcgatcatcacccaactgctg
cagacgccgccgccgaaagaacgctacatgggtgaaccgcgcgcgctgatcatcgccccg
acccgggagctggtggtacagatcgccaaggacgccgccgacctgaccaagtacaccggc
ctcaacgtcatgacattcgtcggtggcatggacttcgacaagcagctcaagcacctcgaa
gcccgtcactgcgacatcctggtagccacgccgggccgcctgctcgacttcaaccagcgc
ggcgacgtgcacctggacatggtcgaagtgatggtgctggacgaagccgaccgcatgctc
gacatgggctttatcccgcaagtgcgccagatcattcgccaaactccaccgaaggccgag
cgccagaccctgctgttctccgcgaccttcaccgaagacgtgatgaacctcgccaagcag
tggactaccgacccgtccatcgttgagatcgaagcgctcaacgtcgccagcgaaaacgtc
gagcaacacatctacgccgtggccggcgccgacaagtacaagctgctctacaacctgatc
aacgataacggttgggagcgggtgatggtgttcgccaaccgcaaggatgaagtacgccgc
atcgaagagcgcctggtgcgtgacggcgtcaacgccgcgcagctgtcgggcgacgtgccg
cagcataagcgcatcaagacattggaaggctttcgcgaaggcaagattcgcgtgctggtg
gccaccgacgtggccgggcgcgggattcacatcgacggcatcagccacgtgatcaacttc
accctgccggaagtgccggacgactacgtgcaccgcattggccgtaccggccgtgccggg
gcggcgggggtgtcgatcagttttgcgggtgaggatgactcgtaccagttgccgtcgatt
gagacgttgctgggccgcaagatcagctgtgagacgccgtcgacgcatttgctgcgggcg
gtggaacgtaagcggccttaa
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